Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1091 atgaggtCTTTTCATGTCACAGTGACAGCTCTGTGCTGTGTGGTGGTTGTGCTTGGAGTGCTACCACTCTCCTTAGATGCACAACTAGATCCCTCGTTTTACAGGAACACCTGTGCCAAAGTTCACTCCATTGTGCGCGAAGTGGTGAGGAGCGTTTCAAAGAAAGATCCCCGTATGCTTGCCAGTCTCGTTAGACTTCACTTTCATGACTGCTTTGTTCAAGGCTGTGACGCATCAATTTTGTTGAACAACACTGCCACGATAGTGAGTGAGCAACAAGCTTTGCCAAACAACAACTCAATTAGAGGTTTGGATGTTGTGAACCAGATCAAGACAGCAGTGGAAAATGCTTGCCCCGGCGTGGTTTCTTGTGCTGATATTCTTGCCCTTGCAGCTGAAATATCTTCTGTTCTGGGTGGTGGTCCTGATTGGAAAGTTCCCTTGGGAAGAAGGGATAGTTTAACAGCAAATCGAACCCTTGCCGATCAAAACCTTCCAGCTCCCTTCTTCAACCTTACTTTACTTAAAGCCGCCTTTAAAGTTCAAGGTCTCGACACTACTGATCTAGTTGCACTCTCAGACACCATCAGCATTGTCAACAAGTTCAGCAGTGACCAAAAAGCTTTCTTTGACAGCTTTGAGGCTTCAATGATTAAAATGGGTAATATTGGTGTGCTAACTGGGAAGAAAggagaaataagaaaacattgtaattttgttaACAAGAAATCTGCTGAACTTGATATTGCTAGCGTGGCCTCCGAAGAATCATCAGCGGAGGGTATGGTTAGCTCAATCTAA 801 0.4307 MRSFHVTVTALCCVVVVLGVLPLSLDAQLDPSFYRNTCAKVHSIVREVVRSVSKKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNQIKTAVENACPGVVSCADILALAAEISSVLGGGPDWKVPLGRRDSLTANRTLADQNLPAPFFNLTLLKAAFKVQGLDTTDLVALSDTISIVNKFSSDQKAFFDSFEASMIKMGNIGVLTGKKGEIRKHCNFVNKKSAELDIASVASEESSAEGMVSSI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1091 266 Gene3D - 221 241 - -
Ssu1g1091 266 PANTHER PEROXIDASE FAMILY PROTEIN 7 193 - -
Ssu1g1091 266 PANTHER PEROXIDASE 72-RELATED 193 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 Gene3D Peroxidase, domain 2 196 220 - -
Ssu1g1091 266 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 ProSiteProfiles Plant heme peroxidase family profile. 199 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 Pfam Peroxidase 45 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 ProSiteProfiles Plant heme peroxidase family profile. 28 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 CDD secretory_peroxidase 28 240 IPR033905 GO:0004601|GO:0042744
Ssu1g1091 266 Gene3D - 32 165 - -
Ssu1g1091 266 PANTHER PEROXIDASE FAMILY PROTEIN 193 251 - -
Ssu1g1091 266 Gene3D Peroxidase, domain 2 166 195 - -
Ssu1g1091 266 PANTHER PEROXIDASE 72-RELATED 7 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu1g1091 266 SUPERFAMILY Heme-dependent peroxidases 28 241 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1091 Ssu-Chr1 23400803 23404517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1091 180 258 Peroxidase AT3G32980 35.714 1.72e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1091 K00430 - gmx:100804829 330.102