Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1051 ATGGATAAAAGAATTCTAGTATTCCTACTACTCATTTTCACTCATTTGTTGATTGTACTGGCACAGACAGCAAGTCAGGATTACACTATTCTGCTGGCTCTAAAGAATGAATGGCAAAACACACCACCTAATTGGGTGGGTTCAGATCCTTGTGGTGATGGTTGGGATGGCATTGAGTGTTCCAATTCACGCGTTACCTCCATATCATTAGCAAGCATGGGTTTGTCTGGCCAGCTTTCTTCAGATATTGGATTACTATCTGAACTACTGATTTTGGATCTGTCTTACAATAGGAATTTAACTGGACCACTTCCCAATGACATTGGAAACTTGAAAAAGCTGACAAACTTaCTTCTTATTAGTTGTGGTTTCACTGGTCCTATCCCAGAGACAATTGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATGGCTTCAGTGGGTCAATTCCAGCTGCCATTGGTAATCTCTCAAATATTTATTGGCTAGACTTAGCCGATAACCAGCTTGGAGGGACCATCCCCATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACAATACATGGCACTTTCATTTTGGGAAGAATAAGCTTTCAGGAGACATTCCTTCTCAACTTTTTAGCCCGAATATGTCTCTCATTCATGTGCTTTTTGAATCCAACCTATTTACTGGCAGCATTCCATCTACACTTGGCCTGGTCAAGACTCTGGAGGTGGTGCGTTTTGATGTTAACTATTTAAATGGACCTTTGCCTCTAAACATCAACAATCTTACAAGTGTTAGGGAATTGTTCCTGTCCAACAATCGCCTGTCTGGTTCCATGCCAAACCTTACTGGAATGAATGCCCTCAGTTACCTGGATATGAGCAATAATAGTTTTAATCCATCAGACTTTCCACTGTGGATGTCAACTCTTCCATCTCTGACGACAATAATGATGGAGAATACAAAACTTCATGGACGTATTCCTGTTTCCTTGTTCAGCCTGGTACAGTTGCAGACAGTGGTGCTGAGAAACAACCAGCTAAATGGCACTTTAGATATTGGCACATCCATCAACCAACTGGATCTCCTTGATTTGCAGACTAATTTAATTGAAGATTTTAATCCACAAATCGATGTCTCTAAAGTGGAGATAATACTTGTGGACAATCCAATTTGCCAAGAGACAGGAGTACCACCGACATATTGCTCCATTGCAAAGTCCAATGACTCGTATACAACACCACCAAATAACTGTGTGCCTGTTCCCTGCAGCTTAGATCAGACATTAAGCCCCAACTGCAAATGTGCATACCCATATACAGGAATTTTCACTCTCAGAGCTCCTTCCTTCTCAGACTTGGGAAACAAAACTGTCTTTGTAAAGCTGGAGTCAAATCTGATGCAGTCTTTTCAAGATCATGATGAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGTGGAACACATATCAGTACCTTGATTTGACTTTAAAAGTATTTCCATCAGGCCAAGATCGTTTCAATCGAAAAGGGATTTCTGCTATAGCCTTTCTTTTTAGCAACCAAACATATAAGCCTCCTCCAATGTACGgaccatattattttattggtgATGAGTATGATCACTATAAGGATAATTCAGTATTAGAAGGTCCTGTGACATCCGGTAAATCTTCAAATACTGGCATCATAGCTGGAGCTGCTGCTGGTGGTTCTGCCCTGTTGGTGTTAGTACTCCTTGCATGTGTGTATGCTCTCCGCCagaagaaaaatgcaaaaaaagcaACTGGGAAAAGCAATCCTTTCGAAAAATGGGATCCGGATGAGAGCAATGGTAGCATCCCACAGTTGAAAGGAGCAAGGCGCTTCGGTTTTGAAGAGATACAGAACTGCACCAAAAACTTTTCACAAGTCAATAATATAGGATCTGGCGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGGCAACTAATTGCAGTAAAACGAGCTCAAAAGGAATCTATGCAGGGAGGGTTGGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTATCGGTTTCTGCTTTGAGCAAGGAGAACAAATGCTAATCTATGAGTACGTTGCAAATGGTCCTTTGAAGGATACTCTTTCAGGGAGGTCTGGAATTAGATTGGACTGGATTAGAAAGCTAAAAATAGCCCTTGGTGCTGGGAGGGGGCTGGATTATCTCCATGAACATGCCAATCCTCCTATCATACACAGGGACATCAAATCCGCCAACATTTTACTGGATGAGCGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGAAGGTGCAAAAGGTTATATTACCACCCAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGGGTGCTAATGTTGGAGCTGATAACTGCAAAAAGGCCAATAGAGCGAGGGAAATATATTGTGAAAGTGGTTAAGGATGCTATTGACAAGACAAAAGGCTTATATGGTCTTGAGGAACTTCTTGATCCAACTATGGAATTGGGGACAGCACTGAGCGGTTTTGAGAAGTTTGTGGACCTTGCAATGCAGTGTGTTGAAGAGTCAAGTTCTAACAGGCCTTCAATGAATTATGTGGTGAAAGAAATTGAAAACTTGTTGCAGTTGGCCGGTTCAAACCCCACTTTATCAGCATCAGCATCCACCTCATCTAGTTATAATAATGCAAGTAAGGGGAGTTCCCTGCATCCTTACGAAAATGAATACCTTGATTCAAGTGTGGTACTTCCACGTCCATAA 2862 0.4092 MDKRILVFLLLIFTHLLIVLAQTASQDYTILLALKNEWQNTPPNWVGSDPCGDGWDGIECSNSRVTSISLASMGLSGQLSSDIGLLSELLILDLSYNRNLTGPLPNDIGNLKKLTNLLLISCGFTGPIPETIGNLERLVFLSLNSNGFSGSIPAAIGNLSNIYWLDLADNQLGGTIPISNGTTPGLDMMHNTWHFHFGKNKLSGDIPSQLFSPNMSLIHVLFESNLFTGSIPSTLGLVKTLEVVRFDVNYLNGPLPLNINNLTSVRELFLSNNRLSGSMPNLTGMNALSYLDMSNNSFNPSDFPLWMSTLPSLTTIMMENTKLHGRIPVSLFSLVQLQTVVLRNNQLNGTLDIGTSINQLDLLDLQTNLIEDFNPQIDVSKVEIILVDNPICQETGVPPTYCSIAKSNDSYTTPPNNCVPVPCSLDQTLSPNCKCAYPYTGIFTLRAPSFSDLGNKTVFVKLESNLMQSFQDHDEPVDSVSLSNPRWNTYQYLDLTLKVFPSGQDRFNRKGISAIAFLFSNQTYKPPPMYGPYYFIGDEYDHYKDNSVLEGPVTSGKSSNTGIIAGAAAGGSALLVLVLLACVYALRQKKNAKKATGKSNPFEKWDPDESNGSIPQLKGARRFGFEEIQNCTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQMLIYEYVANGPLKDTLSGRSGIRLDWIRKLKIALGAGRGLDYLHEHANPPIIHRDIKSANILLDERLNAKVSDFGLSKPLGEGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITAKRPIERGKYIVKVVKDAIDKTKGLYGLEELLDPTMELGTALSGFEKFVDLAMQCVEESSSNRPSMNYVVKEIENLLQLAGSNPTLSASASTSSSYNNASKGSSLHPYENEYLDSSVVLPRP 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1051 953 MobiDBLite consensus disorder prediction 919 936 - -
Ssu1g1051 953 ProSiteProfiles Protein kinase domain profile. 635 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g1051 953 Gene3D Phosphorylase Kinase; domain 1 606 710 - -
Ssu1g1051 953 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Ssu1g1051 953 PANTHER - 6 933 - -
Ssu1g1051 953 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Ssu1g1051 953 CDD STKc_IRAK 641 907 - -
Ssu1g1051 953 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 933 - -
Ssu1g1051 953 MobiDBLite consensus disorder prediction 919 938 - -
Ssu1g1051 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Ssu1g1051 953 Pfam Protein kinase domain 636 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g1051 953 Gene3D Transferase(Phosphotransferase) domain 1 711 923 - -
Ssu1g1051 953 Gene3D Ribonuclease Inhibitor 188 385 IPR032675 -
Ssu1g1051 953 SMART serkin_6 635 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g1051 953 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Ssu1g1051 953 SUPERFAMILY L domain-like 42 398 - -
Ssu1g1051 953 SUPERFAMILY Protein kinase-like (PK-like) 621 930 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1051 Ssu-Chr1 22678893 22688015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1051 7 951 Receptor kinase-like Gene Family AT5G49760 57.218 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Ssu1g1051 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1051 - - gmx:100782366 1553.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0043 6 905688 912080 Ssu1g1051 1 22678893 22688015 PCT