Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1048 ATGGCTGCTGGATGTGCTGAAGGGGTTGCTAATAATCTGAAGCTTTATTCATACTGGAACAGCTCATGTTCCTTCCGAGTCCGAATTGCTCTCAACTTGAAAGGGATAAAATATGAGTACAAAGCAGTGGATCTGTTGAAGGGGGAACAATCTGACCCTGAGTTTCTGAAGCTCAATCCTATTGGATTTGTACCCATTTTAGTGGATGGGGATGTAGTAATAGCTGACTCTTTTGCTATTATCATGTATTTGGAAGATAAGTATCCTCAAAACCCTTTGCTGCCTCATGATATTCATAAAAGAGCAATCAATTTCCAGGTTGCTACTATTGTTTCTTCAACTATACAGCCTCTTCATAATCTACGTTTACTGAAGTACATTGAGGAAAAAGTTAGCCATGAAGAAACACATCGTTGGACCAACAGTGTAATTGAAAGATGCTTCAAAGCGCTGGAAAAGCTATTGAAGGACCATAGAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCTGATTTGTTTTTAGCACCTCAGTTATATGCAGCATTTACAATGTTGAACATTGACACGAAGTTGTTCCCCATTCTGGCGGGACTACACAAGTCATATAAAGAGATCCCAGCATTCCACGAGGCTTTGCCAGAGAACCAGCCAGACGCAGAACACTAA 669 0.4081 MAAGCAEGVANNLKLYSYWNSSCSFRVRIALNLKGIKYEYKAVDLLKGEQSDPEFLKLNPIGFVPILVDGDVVIADSFAIIMYLEDKYPQNPLLPHDIHKRAINFQVATIVSSTIQPLHNLRLLKYIEEKVSHEETHRWTNSVIERCFKALEKLLKDHRGRYATGDEVFLADLFLAPQLYAAFTMLNIDTKLFPILAGLHKSYKEIPAFHEALPENQPDAEH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1048 222 Gene3D - 97 222 - -
Ssu1g1048 222 Pfam Glutathione S-transferase, C-terminal domain 126 210 IPR004046 -
Ssu1g1048 222 CDD GST_N_Zeta 13 85 IPR034333 -
Ssu1g1048 222 SFLD Glutathione Transferase (cytosolic) 13 194 IPR040079 -
Ssu1g1048 222 SUPERFAMILY GST C-terminal domain-like 92 220 IPR036282 -
Ssu1g1048 222 SUPERFAMILY Thioredoxin-like 12 95 IPR036249 -
Ssu1g1048 222 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 7 222 - -
Ssu1g1048 222 PANTHER MALEYLACETOACETATE ISOMERASE 7 222 - -
Ssu1g1048 222 Pfam Glutathione S-transferase, N-terminal domain 13 85 IPR004045 -
Ssu1g1048 222 SFLD Main (cytGST) 13 194 - -
Ssu1g1048 222 CDD GST_C_Zeta 99 217 IPR034330 -
Ssu1g1048 222 Gene3D Glutaredoxin 10 96 - -
Ssu1g1048 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 222 IPR010987 -
Ssu1g1048 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 11 92 IPR004045 -
Ssu1g1048 222 TIGRFAM maiA: maleylacetoacetate isomerase 14 220 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1048 Ssu-Chr1 22661482 22668787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1048 13 220 Glutathione S-transferase Gene Family AT2G02380 61.538 3.44e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1048 K01800 - gmx:547590 324.324