Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1045 atgGCAGAAGAACTGAACCATTCTCTGGAATATACACCAACATGGATTGTTGCAGTTGTTTGCTCCATCATTGTTTTCATCTCTCTTTGCGTTGCGCGTGCCCTTCACCGCCTTGGAAAGTACCTGCAGAGAAAAGATCAGACTGCATTGAAGGAAGTCTTACAAAAATTGGAAGAAGAATTGATGCTTTTAGGGTTTATTTCCCTCCTATTAACCGTAGTTCAAGGTCTAATAAGCGAAATTTGCATCTCACCAAAGCTTGCAACCCAAATGCTTCCATGCAAGAGACCTCATGGGTCTTCAGAAGGTTCAGAGCATGATCAGATACACTATGATGCTATAATAAACAGACGGAGGCTTTTCTCTACAGAAACTGGCTCAGATCATTGTAGGCAAAAGGGGAAGGTTCCATTGTTATCACTGGAATCGTTACATCATCTTcacatttttatctttgtattgGCCGTTGTACATGCAGTATTCTGTGTCATCACAATGGTTCTTGGAGGTGCAAAGATCCGCGAATGGAAGATCTGGGAGGATCACAATAAGGAGGAGATCAAAAATTCAAATGATAAAGAGTACCTTGAGTTCTTCAAAACACATGCTAGTGGGCATTGGAGAAGAGCAGCTGTTGTTAGTTGGCTGATATCATTCTTCAAGCAATTTTATGGCTCTGTTACAAAGAGTGACTACCTTGCACTGCGGTATGGATTTGTCAAGGAACACCGCCTAGATAACCagaaatatgattttcataagTACATGCTGAAGACACTTGAAATCGACTTCAAAAAAGTTGTAGGCATAAGCAGGTATCTGTGGCTCTTTGTTGTGCTGTTTTTGCTGTTGGATCTTGaagGATGGCACACTTATTTCTGGTTAGCCTTTTTACCATTGATACTTCTACTTCTTGTGGGTGCAAAGTTGGAGCACATAATCGCTCGTTTGGCTCAGGAGTCAATAAAAATGATGGGAAAGGAAGGTCCCACTGAACGAGTGAAGCCATCAGATGAATACTTTTGGTTTACCAGCCCAGCCCTAGTCCTTGACTTACTTCActtcattttgtttcaaaactcTTTTGAGATTGCGTTTTCCTTCTGGATTTGGAGCACATATGGATTTGATTCATGCATTATGGAGAAAATAGCCTACATTATCCCAAGACTTATAATGGGTGTAATTGTTCAAGTGCTTTGCAGTTACAGCACCTTGCCTTTGTACACTATTGTGACTCAGATGGGTACCAAAAGCAAGATTGATAAGTTAGATGAAAGGGCTGAAAGTCCCGATACAAGGCAGATCATGTCCCACAGCATGACCAGAGAATCAACCCAACATCCTCAAATTGATGAACAAGCAATAATCATGGTGGAAGATGCAACATCTACACTTGAGCTTCACGTCATTGCCCAAGCTCCTTTGCAGAGACCTAATGCATCCAAtagttattcttcaacaaataTTCACTAG 1476 0.395 MAEELNHSLEYTPTWIVAVVCSIIVFISLCVARALHRLGKYLQRKDQTALKEVLQKLEEELMLLGFISLLLTVVQGLISEICISPKLATQMLPCKRPHGSSEGSEHDQIHYDAIINRRRLFSTETGSDHCRQKGKVPLLSLESLHHLHIFIFVLAVVHAVFCVITMVLGGAKIREWKIWEDHNKEEIKNSNDKEYLEFFKTHASGHWRRAAVVSWLISFFKQFYGSVTKSDYLALRYGFVKEHRLDNQKYDFHKYMLKTLEIDFKKVVGISRYLWLFVVLFLLLDLEGWHTYFWLAFLPLILLLLVGAKLEHIIARLAQESIKMMGKEGPTERVKPSDEYFWFTSPALVLDLLHFILFQNSFEIAFSFWIWSTYGFDSCIMEKIAYIIPRLIMGVIVQVLCSYSTLPLYTIVTQMGTKSKIDKLDERAESPDTRQIMSHSMTRESTQHPQIDEQAIIMVEDATSTLELHVIAQAPLQRPNASNSYSSTNIH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1045 491 PANTHER MLO-LIKE PROTEIN 13 5 457 - -
Ssu1g1045 491 PANTHER MLO-LIKE PROTEIN 1 5 457 IPR004326 GO:0006952|GO:0016021
Ssu1g1045 491 Pfam Mlo family 7 430 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1045 Ssu-Chr1 22627669 22632132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1045 8 429 MLO family AT4G02600 54.402 7.41e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1045 K08472 - gmx:100792763 739.184