Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0896 ATGCTACGTGTTGGTGATTTAGAGCGCTCgattaagttttatgaaaagGCTTTGGGTTTGAGGGTGGTAAATAAGGTTGAAAGACCTCAATACAAGTTCACTATAGCTATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTGTTGGAGCTGACATATAACTATGGTGTCACTGAGTACACCAAGGGAAATGCTTATGCACAGGTGGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTTGTCAACTTAGTCACTCAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCTGGCCTTAACACGAAGATCACTGCTTTCTTAGATCCTGATGGATGGAAAACTgTCTTGGTCGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 399 0.4236 MLRVGDLERSIKFYEKALGLRVVNKVERPQYKFTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0896 132 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 118 IPR004360 -
Ssu1g0896 132 Gene3D - 1 132 IPR029068 -
Ssu1g0896 132 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 1 132 - -
Ssu1g0896 132 PANTHER LACTOYLGLUTATHIONE LYASE 1 132 - -
Ssu1g0896 132 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 1 124 IPR029068 -
Ssu1g0896 132 TIGRFAM glyox_I: lactoylglutathione lyase 1 127 IPR004361 GO:0004462|GO:0046872
Ssu1g0896 132 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 124 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0896 Ssu-Chr1 19841983 19854643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0896 1 123 Calmodulin-binding Proteins AT1G08110 27.027 1.68e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0896 K01759 - gmx:100799447 258.455