Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu1g0868 | ATGAGATGCTTGCCATGCTGCAACTGCAAGTCAAATGCTGAATCACCATCTTCCAGAGCATGCCCCCGCCAAATTTCCAAAGGGAGGAGAACATTCAAATCATTAGCTGCAGCTGTGTCACTTAAAACAGGTAGCAGCAGGCATAGACAAATAGATGCAGAGATAAGAAAATATGGATCTGCAAAAAACGATGTCAAAATATTCACATATGAACAACTTGCTGAAGCAACAAACAACTACAATCCTGATTGCCTGGTGGGCGAAGGTGGATTCGGGAATGTTTACAAAGGATACTTAAAAAGTGTTGAACAAACTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGCCCAAGGAACACGAGAATTTTTCGCAGAAATTTTGATGTTAAGCATGGTGCAACACCCAAACCTTGTGAGGCTCATTGGTTATTGTGCAGAAGGCGCTCACAGgattttagtttatgaataCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACATAGGTGCAGATAAGGAGCCTTTGGATTGGAAGACTAGGATGAAAATAGCTGAGGGAGCAGCTAGAGGACTTGAATATTTGCATAACAGTGCAGATCCACCAGTGATATACCGTGATTTCAAATCATCTAATATACttttagatgaaaattttaatgcaaAGCTATCTGATTTTGGACTTGCTAAGATTAGTCCAAAAGAAGGCCAGGACCATGTGTCAACCAGGGTGATGGGGACTTTTGGCTACTGTGCACCAGAGTATGCTGCTACGGGTCAGCTAAGCTCAAAGGCAGACATTTATAGTTTTGGGGTAGTGTTTTTGGAAATAATCACGGGTAGGAGAGTATTTGACACTGCAAGAGTCGCAGAAGAGCAAAACTTGATTGACTGGGCACAACCTTTGTTTAAGGACAGAACAAAGTTCAATCTAATGGCTGACCCTTTGCTTAAAGGTCAGTTCCCTGTGAAGGGTCTATTTCAGGCTCTTGCAGTGGCAGCAATGTGTCTCCAAGAGGAAGCTGACACACGACCTTACATGGATGATGTTGTGACGGCTCTTGCGCATCTAGCAGTGCACAAAGTTGGAGAAAAGGACATAGCTGGTGAATCTATAAAATGTGCCGGGCATGTTGAATCTTTTAGAGCTGCAAGTTCAGCTGGATCTGAAAGGGCGTAA | 1179 | 0.4241 | MRCLPCCNCKSNAESPSSRACPRQISKGRRTFKSLAAAVSLKTGSSRHRQIDAEIRKYGSAKNDVKIFTYEQLAEATNNYNPDCLVGEGGFGNVYKGYLKSVEQTVAVKVLNREGAQGTREFFAEILMLSMVQHPNLVRLIGYCAEGAHRILVYEYMANGSLENHLLDIGADKEPLDWKTRMKIAEGAARGLEYLHNSADPPVIYRDFKSSNILLDENFNAKLSDFGLAKISPKEGQDHVSTRVMGTFGYCAPEYAATGQLSSKADIYSFGVVFLEIITGRRVFDTARVAEEQNLIDWAQPLFKDRTKFNLMADPLLKGQFPVKGLFQALAVAAMCLQEEADTRPYMDDVVTALAHLAVHKVGEKDIAGESIKCAGHVESFRAASSAGSERA | 392 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu1g0868 | 392 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 352 | IPR011009 | - | |
Ssu1g0868 | 392 | PANTHER | OS07G0668900 PROTEIN | 1 | 390 | - | - | |
Ssu1g0868 | 392 | ProSiteProfiles | Protein kinase domain profile. | 80 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu1g0868 | 392 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 156 | - | - | |
Ssu1g0868 | 392 | Pfam | Protein kinase domain | 85 | 292 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu1g0868 | 392 | ProSitePatterns | Protein kinases ATP-binding region signature. | 86 | 109 | IPR017441 | GO:0005524 | |
Ssu1g0868 | 392 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 203 | 215 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu1g0868 | 392 | Gene3D | Transferase(Phosphotransferase) domain 1 | 157 | 373 | - | - | |
Ssu1g0868 | 392 | CDD | STKc_IRAK | 86 | 354 | - | - | |
Ssu1g0868 | 392 | PANTHER | RECEPTOR SERINE/THREONINE KINASE | 1 | 390 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu1g0868 | Ssu-Chr1 | 19241383 | 19243528 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu1g0868 | 66 | 363 | Glycoside Hydrolase | AT3G07070 | 62.752 | 1.31e-139 | 402 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Ssu1g0868 | Pkinase | 7.6e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu1g0868 | - | - | gmx:100305361 | 681.019 |