Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0836 ATGAACCTACGGCACAATCCCAACCTCGTCCTCACCTTCCACCAACCTCGAGTCATCTCACACGCCAAGCAGAGGATTAAGAAGGGTCTTGGAACTCGCTGTCCATGGAAGATCATATTCGATTTTCAATTGTTCGGCCTTCCTGACGGTCTCAAACAATTGGCCAAATTTGATCCTATGGTTGTGTGTACTATAAAGGAGTCTAGAGAGCACATTGTTACTGGTGCTAGAGAACTCCACGTGGAACCATATGAAGGAACAAAAAACAATAGCGTGTAA 279 0.4516 MNLRHNPNLVLTFHQPRVISHAKQRIKKGLGTRCPWKIIFDFQLFGLPDGLKQLAKFDPMVVCTIKESREHIVTGARELHVEPYEGTKNNSV 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0836 92 Gene3D Elongation Factor G (Translational Gtpase), domain 3 43 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0836 Ssu-Chr1 18428016 18430977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0836 47 82 Eukaryotic Initiation Factors Gene Family AT1G56070 72.222 4.39e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0836 K03234 - gmx:100788357 56.6102