Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu1g0792 | ATGGCATCATTGGTTGCCAGTGGTAGCAGTCAAATGGCTCTTTCAGTTTCTGTCCAAGAAAAAGGAAgtagaaataagagaaaattcaGGGCTGATCCACCCTTAGGGGAGCCAAACAAGATTATTCCTTCACCTCAACATGAAAGCCTCAGCTATGAATTCTCTGctgaaaagtttgaaataacCGCAGGTCATGGGCAAGCTAGTGCTTCTGACATATGTAGGGTAAGCCAAGATCATTCTGATGGGTTGAAGCTTGACCTTGGATTGTCTAGTTCAATAGCTTCACCTGAGGTCAGGCTTAGCCAACCTAAGGAGGAACTTGAGGTGGATGAATTTAATGATGCTGATTGGGGTGATTACAGTGAAGCCGAATTGGAAGAACTTGTCCTGAGCAATTTGGACACTATTTTCAAGAGTGCAATTAAACAAATTGTTGCTTGTGGCTACACTGAAGACGTTGCTACAAAGGCCATCTTAAGGTCTGGCATCTGTTATGGATGTAAAGATGTTGTGTCTAATATAGTTGATAATGGTTTAGCATTTCTTAGAAATGGCCAAGAGATCAATCCTTCGCGAGAGCACTATTTTGAAGATTTAGTGCAGCTAGAGAAGTATATTTTGGCTGAATTGGTTTGTGTTCTTCGGGAGGTTAGGCCATTCTTCAGTACTGGCGATGCAATGTGGTGTTTGCTAATTTGTGACCTGAATGTGTCACATGCTTGTGCAATGGATGGTGACCCTTCAAGTAGTTTAGGTAGTGGTGGCATTGCTGATGGTTGTTCTTCTGTTCAGACTGAAtcacaatcaaaattagaaacaaaagcTCCTGAATTGAGTCTTCCAAGTCCTTGTAAATCAGTTCCCTCAGGTTCTAAATCTGAGAAATCCTCTGTGGCAGGAAATACTGGTTTGGACAACTCAAAGAATTCTCAAATTCTTGTTGGACTCTCGGAGAAAGAGGGTGCTAATTCTGCAAGTGATTCTATTGATAAATCATCTAGTACTACTGGGACATCTCAATCTCCCTTGGTGGAAGAAAAGTGTGGGAGTGCTAGAAAGATCCATTCCAGTACAACTAGGAGAGACTACATTCTTCGACAGAAGTCATTTCATGTGGAAAAAGGTTATCGGACATATGGGTCTAAAGGGTCTTCAAGAGGAGGAAGGCTGAATGGCTTAAATGGATTAATCTTggataaaaaacttaaatctgTATCTGAATCTACTACCATAAACTTAAAGAGTGCATCCTTTAACATAAGTAAGGCAATGGGAGTTGATGTGACACAAGACAATTTGAATGCTGATTTCTCATCTAATGATGGACCTACCCCCACTGCATTTAGCCTGGATTCTACTGATACTGTTTCTCAGCCATTTGATACTTCATCTTCAGTACATGAAGCAAATGCTATACCTGCAGCTGGTAGCCCAGATGCATTATCAGCTACAGATACtgatctttctctttctttgtctTCAAAAAGTAAGTCTCCTTCAACACCTATCTGCTGCAACAATGAGGCACCTAATAGTAGTTGTGTGGGGATACCGTATGACAAGTCCCTTGGGCAGTGGATACCGCAAGATAGAAAGGATGAGATGATTTTGAAACTGGTTCCAAGGGTTCGGGAGCTGCAAAATCAGCTTCAAGAATGGACAGAGTGGGCAAATCAGAAGGTTATGCAGGCTGCTCGTCGGCTGAGTAAGGACAAGGCTGAGCTTAAGACACTAAGGCAAGAGAAGGATGAAGTTGAACGTCTTAAGAAAGAGAAGCAATCTCTAGAGGAAAACACTATGAAGAAGATTTCCGAGATGGAAAATGCCTTGTCTAAAGCAAGTGTGCAGGTAGAACGAACTAATGCTGATGTCCGGAAGCTGGAGGTGGAGAATGCTGTGCTGAGGAAAGAGATGGAGGCTGCTAAGTTACGAGCGGCAGAATCAGCCACAAGCTGTCAAGAGGTCTcaaggagagaaaagaagacCCAAATGAAGTTTCAATCATGGGAGAAGCAGAAATCCTTGTTTCAAGAAGAGGTAATGACTGAAAAACACAAATTGGTTCAGTTGCAGCAAGAATTAGAGCAAGCTAAAGTGCACCAGGAGCAAGTTGAGGCTAGGCGGCAGCAGGCAGCAAAGGCAAAAGAAGAACTCCTCCTACAGGCCAGTtctataagaaaagaaagggaaCAAATTGAGGAGTCTGCAAAATCGAAGGAGGATATGATCAAACTGAAAGCAGAGGAGAATCTGCAGAGGTACAGAGATGACATCCAGaaacttgaaaaagaaattgcacAACTGAGACAGAAGACCGACTCCTCCAAAATTGCTGCACTTAGAAGGGGAATTGATGGAAGCTATGCCAACAGCTTTATGGACATGAAAAATGGCACTGCTCGGGAAGAATCTCGGGCCACTTTAATCTCAGAACTGGTTACAAATTTAAATGACTACTCTTTGACAGGGGGTGTTAAACGGGAAAGAGAATGTGTGATGTGCCTTTCTGAGGAGATGTCTGTTGTATTCCTCCCATGTGCTCATCAGGTTGTTTGCACAACATGCAATGAGCTCCATGAGAAACAAGGTATGCAAGACTGTCCTTCTTGCAGGAGCCCCATCCAGAAACGTATTTCTGTTCGTTTTGCccgtacataa | 2661 | 0.4051 | MASLVASGSSQMALSVSVQEKGSRNKRKFRADPPLGEPNKIIPSPQHESLSYEFSAEKFEITAGHGQASASDICRVSQDHSDGLKLDLGLSSSIASPEVRLSQPKEELEVDEFNDADWGDYSEAELEELVLSNLDTIFKSAIKQIVACGYTEDVATKAILRSGICYGCKDVVSNIVDNGLAFLRNGQEINPSREHYFEDLVQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDLNVSHACAMDGDPSSSLGSGGIADGCSSVQTESQSKLETKAPELSLPSPCKSVPSGSKSEKSSVAGNTGLDNSKNSQILVGLSEKEGANSASDSIDKSSSTTGTSQSPLVEEKCGSARKIHSSTTRRDYILRQKSFHVEKGYRTYGSKGSSRGGRLNGLNGLILDKKLKSVSESTTINLKSASFNISKAMGVDVTQDNLNADFSSNDGPTPTAFSLDSTDTVSQPFDTSSSVHEANAIPAAGSPDALSATDTDLSLSLSSKSKSPSTPICCNNEAPNSSCVGIPYDKSLGQWIPQDRKDEMILKLVPRVRELQNQLQEWTEWANQKVMQAARRLSKDKAELKTLRQEKDEVERLKKEKQSLEENTMKKISEMENALSKASVQVERTNADVRKLEVENAVLRKEMEAAKLRAAESATSCQEVSRREKKTQMKFQSWEKQKSLFQEEVMTEKHKLVQLQQELEQAKVHQEQVEARRQQAAKAKEELLLQASSIRKEREQIEESAKSKEDMIKLKAEENLQRYRDDIQKLEKEIAQLRQKTDSSKIAALRRGIDGSYANSFMDMKNGTAREESRATLISELVTNLNDYSLTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMQDCPSCRSPIQKRISVRFART | 886 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Ssu1g0792 | 886 | Coils | Coil | 681 | 743 | - | - | |
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 268 | 357 | - | - | |
Ssu1g0792 | 886 | Coils | Coil | 562 | 645 | - | - | |
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 436 | 471 | - | - | |
Ssu1g0792 | 886 | Pfam | Family of unknown function (DUF6592) | 133 | 244 | IPR046527 | - | |
Ssu1g0792 | 886 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 816 | 882 | IPR013083 | - | |
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Ssu1g0792 | 886 | SUPERFAMILY | RING/U-box | 827 | 879 | - | - | |
Ssu1g0792 | 886 | PANTHER | OS05G0141500 PROTEIN | 4 | 885 | IPR046934 | - | |
Ssu1g0792 | 886 | Coils | Coil | 745 | 779 | - | - | |
Ssu1g0792 | 886 | Pfam | Zinc finger, C3HC4 type (RING finger) | 829 | 877 | - | - | |
Ssu1g0792 | 886 | ProSiteProfiles | Zinc finger RING-type profile. | 832 | 872 | IPR001841 | - | |
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 483 | 506 | - | - | |
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 436 | 506 | - | - | |
Ssu1g0792 | 886 | PANTHER | OS05G0141500 PROTEIN | 4 | 885 | - | - | |
Ssu1g0792 | 886 | MobiDBLite | consensus disorder prediction | 285 | 346 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu1g0792 | Ssu-Chr1 | 17340036 | 17343469 | Transposed |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu1g0792 | - | - | gmx:100818439 | 1409.43 |