Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0785 ATGAACGATGAACGAGAACCACAAGCTTCCCCGAGCAATGGCGTCCACAAGtcagaaaaaaaacaaatagctGAAAGGGAGAAATCGATTTTTAGAGGCAGACGTCCACGACCTGGGTTTTCTGATTCATTTTCAAGTATTGACTTGGAAACTTTAGACATTGAGGAGGGATCTCCTACAAGTCATGGATCTGAAACCCCAAGTTCCAGGGCCAGCACTTCTGATTCGGAGGGTCAGGGACCTTTAGTAGGCAATTTACCTTGTAATAATAACCAGTGGCGTGGTTTCTTTAAACTACTGAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCAACCACTTAAAAATGTTCCAAAACTGACAAGAAGAAAGAGCAAGAGAATCAGGGAGGACCTGATTCCATCTCTGAATTCTCCAGCTCTTCAGTCATCTTTTGACACAGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTCTCAGAGATCCAGGCTGCAACCAATGACTTTAGCCAAGATAATTTGATTGGGGAGGGAGGTTATGCTGAGGTTTATTTAGGCAAATTGGAAGATGGAAACTTTGTTGCCATTAAGCGGTTGACAAGAGGGAGCCAAGAAGAAATGACCTGCAGATTTCTTGTCTGA 648 0.4198 MNDEREPQASPSNGVHKSEKKQIAEREKSIFRGRRPRPGFSDSFSSIDLETLDIEEGSPTSHGSETPSSRASTSDSEGQGPLVGNLPCNNNQWRGFFKLLKKGSQMPFQTFQPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDTEFGCFKSSWKNFTLSEIQAATNDFSQDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGSQEEMTCRFLV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0785 215 Gene3D Phosphorylase Kinase; domain 1 135 213 - -
Ssu1g0785 215 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 30 214 - -
Ssu1g0785 215 SUPERFAMILY Protein kinase-like (PK-like) 152 208 IPR011009 -
Ssu1g0785 215 MobiDBLite consensus disorder prediction 18 35 - -
Ssu1g0785 215 MobiDBLite consensus disorder prediction 57 87 - -
Ssu1g0785 215 PANTHER OS08G0249100 PROTEIN 30 214 - -
Ssu1g0785 215 MobiDBLite consensus disorder prediction 1 17 - -
Ssu1g0785 215 MobiDBLite consensus disorder prediction 1 87 - -
Ssu1g0785 215 ProSitePatterns Protein kinases ATP-binding region signature. 177 199 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0785 Ssu-Chr1 17232848 17234285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0785 152 207 Receptor kinase-like Gene Family AT5G56890 48.214 1.87e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0785 - - gmx:102670300 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0785 1 17232848 17234285 Ssu1g0785 1 17232848 17234285 ECH
Ssu1g0785 1 17232848 17234285 Ssu4g0321 4 5334158 5337612 ECH
Ssu1g0785 1 17232848 17234285 Ssu7g1667 7 34644676 34647393 ECH
Ssu1g0785 1 17232848 17234285 Ssu7g2062 7 40845872 40847459 ECH