Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0784 ATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTAGAGAGAAGCTGAATTGGAGCCTCAGATATAAGATTGCTTTGGGGACTGCTGAGGGCCTCCGCTATCTGCATGAGGGATGTCAAAGAAGGATCATTCACAAAGATATCAAGGCTTCTAATATTCTGCTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACCGTCTCCAAAGTGGAAGGCACATTCGGATACCTTCCTCCGGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTATCTGCAAATAACATCAAAGAGCTTGTGGATCCAGTTTTGGCTGATGCTTATGATGAAGAGCAGATGAAACTTGTAACCTTAACAGCTTCTCTGTGTATAGACCAGTCTTCAATTCAGCGACCGGATATGAGCCAGGTGTTAGAGATACTAAGAGGGGAAGAAGAGAGCTTAAGAATCATGAAAGAACGGGTGAAGTCAAAACTTCAGAGGACATACTCTGAAGAACTCTTGGATGCAGAAGAGTACAACTCAACAAAGTTTCTGAATGAGAGGGATCGATATATGGAGACTATTCTAGGCTCCTGTAATTCTATTAGAGAAGAAGGAGATAAAATCTAG 780 0.4218 MFLVLQLSPHGSLSSILYGPREKLNWSLRYKIALGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSANNIKELVDPVLADAYDEEQMKLVTLTASLCIDQSSIQRPDMSQVLEILRGEEESLRIMKERVKSKLQRTYSEELLDAEEYNSTKFLNERDRYMETILGSCNSIREEGDKI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0784 259 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Ssu1g0784 259 SUPERFAMILY Protein kinase-like (PK-like) 2 197 IPR011009 -
Ssu1g0784 259 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0784 259 Pfam Protein tyrosine and serine/threonine kinase 2 196 IPR001245 GO:0004672|GO:0006468
Ssu1g0784 259 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0784 259 PANTHER OS08G0249100 PROTEIN 1 237 - -
Ssu1g0784 259 Gene3D Transferase(Phosphotransferase) domain 1 9 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0784 Ssu-Chr1 17231130 17232777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0784 2 234 Trihelix Transcription Factor Family AT5G38560 39.370 1.26e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ssu1g0784 PK_Tyr_Ser-Thr 3.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0784 - - gmx:100776081 489.189