Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0777 ATGGAAGGCTTCTCGTATCATTTTCTGGAAAATATCTGGAATGTGAGTATTGTGTACCGTCTCCCACATAACCGGACCGAAGACAAAATTTCTTGTGCTTTTGACAATCAGTTATACAAGATATATGTCCCTCATACAGAGGAAAGTCTCTTTGGGCCTGCATTTATTGAGGTGGAGAATGAATCTGGTTTATCAAACTTTATTCCTGTACTCATTGGGGATAAACAAATTTGCAGTGAAATGAAGACACTGCAGCAAAAATTAGATGTATCTCTCCTTTCTAAACAATTCCGGTCTGCATCTGGTCTTTCTATCTGCAGCTCATGTGAAACTTTTGCTCTTAGTCACACAACATCATCAGACTTACTTTTAGATGTAGCATGGTTGCTTAAGGACACTACTTCTGAAAATTTGACAGAGTGA 423 0.383 MEGFSYHFLENIWNVSIVYRLPHNRTEDKISCAFDNQLYKIYVPHTEESLFGPAFIEVENESGLSNFIPVLIGDKQICSEMKTLQQKLDVSLLSKQFRSASGLSICSSCETFALSHTTSSDLLLDVAWLLKDTTSENLTE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0777 140 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 138 IPR044817 GO:0003677
Ssu1g0777 140 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 20 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0777 Ssu-Chr1 17116500 17128305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0777 4 136 SBP-box Gene Family AT5G18830 42.963 2.59e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0777 - - gmx:100776034 213.772