Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0738 ATGGGGTGTGTGTTTGGGAGAGAGTCTTCGAGGGAGGAGAGGAGAGAGGAAGTGAGAGAGGCAAAAGCTGAGGTGGGTAGAGGAGAGGCTGTTGTCGTTGAGAATGAGAACGTTGAGAAGGAGGGTAGAAGGGAGGAGAAGAGGACAAGGGCAAGGGGAGAGAGGAGGCGATCTGCGAAGCCGAATCCGAGGTTGAGCAATCCACCTAACCATGTTCATGGTGAGCAGGTTGCAGCAGGGTGGCCCTCTTGGCTCTCTAAAGTTGCTGGTGAAGCTATCAATGGATTGACCCCTCGGAGGGCTGACACTTTTCAGAAGCTTGATAAGGTGGAGCAGCTACACAAGATATTTAAGCTATGTGGCTCTCCTTCTGATGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAACCCCAACAGTCATACAAGCGATGCATTGCAGAGACATTTAAGGATTTTCCTCCATCATCCCTGCCGCTTATTGAGACCCTTCTCGCAATTGATCCAGATGAACGTTTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAACCATATGCTTGTGAGCCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGCTGATGGTGTCAAGAAATCTCGCCCACGTGAGCGAGTTGGGAGGGGAATTCCAGTTCCAGAGGCCAATGCTGAATTGCAAACAAATATTGATAGACGGCGGCTGATCACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTTGGCTATCCTTTGGGTTCTTCACATCACATGGATCCTGTTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTCTCACAACCTAAAGCAAACATCCAAACATGGTCCGGCCCGTTGGTCGATCCTGCTGCTGTGGGTGCGCCgaggagaaagaagaaacatGGCAAGTGA 1026 0.4776 MGCVFGRESSREERREEVREAKAEVGRGEAVVVENENVEKEGRREEKRTRARGERRRSAKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFQKLDKVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRERVGRGIPVPEANAELQTNIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDPAAVGAPRRKKKHGK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0738 341 MobiDBLite consensus disorder prediction 34 61 - -
Ssu1g0738 341 MobiDBLite consensus disorder prediction 268 341 - -
Ssu1g0738 341 MobiDBLite consensus disorder prediction 222 242 - -
Ssu1g0738 341 PANTHER CYCLIN-DEPENDENT KINASE 1 112 - -
Ssu1g0738 341 PANTHER CELL DIVISION PROTEIN KINASE 110 341 - -
Ssu1g0738 341 PANTHER CELL DIVISION PROTEIN KINASE 1 112 - -
Ssu1g0738 341 Gene3D Transferase(Phosphotransferase) domain 1 88 226 - -
Ssu1g0738 341 PANTHER CYCLIN-DEPENDENT KINASE 110 341 - -
Ssu1g0738 341 SUPERFAMILY Protein kinase-like (PK-like) 104 211 IPR011009 -
Ssu1g0738 341 MobiDBLite consensus disorder prediction 304 319 - -
Ssu1g0738 341 MobiDBLite consensus disorder prediction 34 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0738 Ssu-Chr1 16366081 16372246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0738 111 225 Core Cell Cycle Gene Families AT5G10270 42.241 7.78e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0738 K08819 - gmx:100779413 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0738 1 16366081 16372246 Ssu1g0738 1 16366081 16372246 ECH