Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu1g0720 | ATGTCCACCTCTAGACCCTCAGATGCTTCCCCCAAAGGATATGAGTCCAACCAAACCCAAATGAATTTATCTCTTCTTCAGCGTAACACATCACCTTCTGGTGAGAGAAGAGGCCGAGGAAAGCAAGCAGAACCTGGAAGGTTTCTTGGGGTAAGGAGGCGCCCTTGGGGTAGATATGCTGCTGAAATCAGAAACCCCATAACCAAAGAAAGACATTGGCTTGGAACATTTGACACTGCTGAAGAAGCAGCTCTTGCTTATGACAGAGCTGCCCTGTCCATGAAAGGATGCCAAGCAAGAACCAACTTCATATATTCTGAAGATACCAATATTCCCCACAATGTTCTCACTCCTACGGATTCTCAACCTCTCTTGCCACCTTCACAATTCCTCAATAACACTCACAACACACAACCAACCAACCAAAGTAGCCTATCTCACCTTGGTACTACTTCTTCCCACATTGAAAACCCTTCTGATATGTGTGCATATGGGTCACCTCAGGatgaaaatttcttcttctccaGTGATTCTAACTCGGGCTATCTTGAATGCATAGTTCCTGATAATTGTTTCAGGAAGAGCAATGCCAGTGCTTCAAGTCATGACCTAAATGCTGGCCACGTTAACTCAAACTCCATGCAGGTTCAGTCACATTTTGACACCACTCAAGAAGCCTTGAGCATGCAAACAACAGTGGCCTCTAACTATGCAGATTTTTCTTACCCCGGTCAAGGATTATGGGATGATCAGCAATCATGGGGTTGCAGTTCCAATGAACTAGCAGCTATGTTTAACAATCCATCAAGGGTTGAGGAAGGGTGCACGGATGCATTGTGTCCCATCACTGATGGTCCAAGCTACGGGCTAACGACTCAGGCTGAGGCTGTTTCTTCAACTACTCGTTCTCCATCGATTCCTCCCTTTGGGGATATTGACTTGGGATACTCACTATTCTGA | 960 | 0.449 | MSTSRPSDASPKGYESNQTQMNLSLLQRNTSPSGERRGRGKQAEPGRFLGVRRRPWGRYAAEIRNPITKERHWLGTFDTAEEAALAYDRAALSMKGCQARTNFIYSEDTNIPHNVLTPTDSQPLLPPSQFLNNTHNTQPTNQSSLSHLGTTSSHIENPSDMCAYGSPQDENFFFSSDSNSGYLECIVPDNCFRKSNASASSHDLNAGHVNSNSMQVQSHFDTTQEALSMQTTVASNYADFSYPGQGLWDDQQSWGCSSNELAAMFNNPSRVEEGCTDALCPITDGPSYGLTTQAEAVSSTTRSPSIPPFGDIDLGYSLF | 319 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu1g0720 | 319 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 1 | 319 | - | - | |
Ssu1g0720 | 319 | Pfam | AP2 domain | 50 | 96 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu1g0720 | 319 | CDD | AP2 | 47 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu1g0720 | 319 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 1 | 319 | - | - | |
Ssu1g0720 | 319 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Ssu1g0720 | 319 | SMART | rav1_2 | 47 | 110 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu1g0720 | 319 | MobiDBLite | consensus disorder prediction | 129 | 152 | - | - | |
Ssu1g0720 | 319 | PRINTS | Ethylene responsive element binding protein signature | 70 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu1g0720 | 319 | PRINTS | Ethylene responsive element binding protein signature | 48 | 59 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu1g0720 | 319 | SUPERFAMILY | DNA-binding domain | 48 | 105 | IPR016177 | GO:0003677 | |
Ssu1g0720 | 319 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Ssu1g0720 | 319 | MobiDBLite | consensus disorder prediction | 34 | 48 | - | - | |
Ssu1g0720 | 319 | Gene3D | AP2/ERF domain | 47 | 105 | IPR036955 | GO:0003700|GO:0006355 | |
Ssu1g0720 | 319 | ProSiteProfiles | AP2/ERF domain profile. | 47 | 104 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu1g0720 | Ssu-Chr1 | 16026330 | 16027289 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu1g0720 | 1 | 193 | AP2-EREBP Transcription Factor Family | AT5G18560 | 46.371 | 8.75e-55 | 180 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Ssu1g0720 | AP2 | 6.9e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu1g0720 | - | - | gmx:102664746 | 519.62 |