Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0717 ATGATTCCCAATCCCAACGTTTCTCCGATGAGCGAGGAGGTGAAGAATATCGGAATCGCCCCAGACATCCCTCATTATGGCACCTTTCAAGGCGTGGCTAACTACTATCCGCCTCAGAATCAACACCCACCCTCTCCCTCCGGTGTCCCCTACGCTCATTACCATCGACAAGGATACCACGTCGTTCCAGTTTATGCCGCTGCTGAAGGAAGGCCTTTAAGAGAACGTCGTCTTCCTTGCTGTGGACTTGGCCTGGGTTGGTTCTTGTTTATAATTGGTTGGTTTCTTGGTGGTGTTCCCTGGTACGTTGGAACCTTCATTCTAATGTTTGTACACATGGATTGCCGAGAAAAGCCTGGATTAATTGCATGTGCAGTTGCTTCCTTCGTTACTGTGATAGTTGTTGCCCTTGGTGTCACCCATGGAGATCTTGTGAAGTTGACATCAATGACATGA 456 0.4846 MIPNPNVSPMSEEVKNIGIAPDIPHYGTFQGVANYYPPQNQHPPSPSGVPYAHYHRQGYHVVPVYAAAEGRPLRERRLPCCGLGLGWFLFIIGWFLGGVPWYVGTFILMFVHMDCREKPGLIACAVASFVTVIVVALGVTHGDLVKLTSMT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0717 151 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 15 142 - -
Ssu1g0717 151 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 15 142 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0717 Ssu-Chr1 15982238 15985774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0717 25 144 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 36.612 2.91e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0717 - - gmx:102662831 229.565