Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0703 ATGGGAAATTTTATCTCATATGTCATTTCTATGTATGGGGTGAATGCCACGACAGCAATATCTTTTGTCATCATTGGCTGTCTTTCTCCTTTGATTTATGTGTTCAACAGAAGAAGGCCCAAGCCCGAGGACAAGCAAAAGCCCAAACTTCTTCATACCAGGTCCTTCATCATTAGAGAAATCCATAGTGGCATTCCAGCATTGCATGGATTGGTGGAAGATGATTACAAACAAGCTCGACTAAATCCCTCAACATTAGACAACGCCGACAAACTTCTGAAGGAACATCTTCAACAAGAATATCCGAATTTAATAATTCTTCAGCAAAATGCGGCGAAGCTGGAAATGAGTGCAAAGGAAGATGATGCAGTGAAAATACTTCGAGAGGCGTTGGAAAAGACCAATGCTAAGGAGAAATCACATGAGGCCTACGAGATTGAAATGTTACTAGTAGAAATGCTCATCTACAAGGGAGGGAAATCAGATTTAGAAGAAGCCTTGAAATGTGAATGCTTGAAAGATGAATCGCTTAAAGATGCGCGGCGCCCACTGTACAAGgcaattataaacaaaatgcTGGAGAAGAAAAACGAAACTGAAAAATTTTGGCATGAATTCATTGCAGTACGAGACCCAGCTTTCGGTCGTACTGATGATGAAATTCCTTACGAAATGTTTGAATATCACGCGGACCGTCTTCTACATGAAATATGCTGCAAGTTTGAACATCATGTGGGCCAACTTCGAAATGCTATACAAGAGTCCAGATGCTTCTTCAGATCATCCCCTTTGGATCCCATTCAgaattctctcttctcttaccCTTCTTCTTATGGAGAGCACAAGTACGTTGTCTCAACCACCCGTTCTACCTGCTCTTCCCCTGTCTTCTTTTCAGATTACTGGGATGTTGTGAAGGAGATCAAGGATTACCGCAAGAACTCTCGGGCTCATTCAGGGGCTCTGTGGTATATGCAGGGGAATGCTGAGAGTTTCGGCGGGAATCTCAGCACCCTTACGAGGTTTTCATATTTTGATCATCAAAATGATAGCACGGAAGTTCCATGCGGATTTCTGAAGAAGTTTCCAATCAGTGATTCTGATCGAATTGCGATGGAGAAGTGTGACAGTGTAGTTGTGGTTTCAGCAATCTTCAATGATCATGACAAAATCCGTCAACCGAAGGGCCTTGGATCCAACACATTGGAAGATGTGTGTTTCTTTATGTTTGTAGACGATGTTACCTTCAGAGGTCTTGAACATCACGGATTGATTTCAATAAAATCAAGAGAATACAAGATAGGTGTATGGAGGATTGTGAAGGTTGCAAAAGAGGATTTGTATCAGAACCCAGCGATGAATGGGGTGATACCAAAATATTTAGTCCATAGGCTATTTTCAAATTCCCAATTCAGCCTTTGGATAGATGCAAAGTTGCAACTAATGGTTGATCCGTTGTTGTTGATTCATTCACTTGTTATATCTAAGAATGTAGACATGGCTATATCGAAACACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCTACTGCAAGGTGGAAGAAATGGTGGGATGTGAACGCCTTGAAGGTGCAAATGGAGACATACTGTGAAAATGGGCTGCAACCATGGAGTCCCAGCAAACAGCCCTATGCGTCAGATGTGCCAGATAGTGCTTTGATATTGAGGAGGCATGCATTGGGCAGTAACCTCTTCTCGTGCCTTATATTCAATGAGTTGGAGGCATTTAATCCAAGAGACCAATTGCCTTTTGCATTTGTAAGAGATCACATGAAGCCCAACCTGAAGCTGAACATGTTTGAGGTGGAAGTTTTTGAACAGGTGGCAGTAGAGTACAGGCACAATCTCAAGAGCAGTGATGGGACCACTATGAAGAAAGTGTCCAGTTCAGGAAGAACCAAAAGGGCACACCCAGATTTGTTGTATGTGAATGGCAGCTGTTGCAGCAAGTGCCAGAAGTATCTTTCTATGATGTGGGGGGAATCATCAAATGATTAA 2022 0.4149 MGNFISYVISMYGVNATTAISFVIIGCLSPLIYVFNRRRPKPEDKQKPKLLHTRSFIIREIHSGIPALHGLVEDDYKQARLNPSTLDNADKLLKEHLQQEYPNLIILQQNAAKLEMSAKEDDAVKILREALEKTNAKEKSHEAYEIEMLLVEMLIYKGGKSDLEEALKCECLKDESLKDARRPLYKAIINKMLEKKNETEKFWHEFIAVRDPAFGRTDDEIPYEMFEYHADRLLHEICCKFEHHVGQLRNAIQESRCFFRSSPLDPIQNSLFSYPSSYGEHKYVVSTTRSTCSSPVFFSDYWDVVKEIKDYRKNSRAHSGALWYMQGNAESFGGNLSTLTRFSYFDHQNDSTEVPCGFLKKFPISDSDRIAMEKCDSVVVVSAIFNDHDKIRQPKGLGSNTLEDVCFFMFVDDVTFRGLEHHGLISIKSREYKIGVWRIVKVAKEDLYQNPAMNGVIPKYLVHRLFSNSQFSLWIDAKLQLMVDPLLLIHSLVISKNVDMAISKHPYYVHTMEEAMATARWKKWWDVNALKVQMETYCENGLQPWSPSKQPYASDVPDSALILRRHALGSNLFSCLIFNELEAFNPRDQLPFAFVRDHMKPNLKLNMFEVEVFEQVAVEYRHNLKSSDGTTMKKVSSSGRTKRAHPDLLYVNGSCCSKCQKYLSMMWGESSND 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0703 673 Pfam Protein of unknown function (DUF616) 328 622 IPR006852 -
Ssu1g0703 673 PANTHER ALKALINE CERAMIDASE-RELATED 247 670 IPR006852 -
Ssu1g0703 673 PANTHER OS01G0210400 PROTEIN 247 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0703 Ssu-Chr1 15693290 15703572 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0703 - - gmx:100809755 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0703 1 15693290 15703572 Ssu1g0703 1 15693290 15703572 ECH
Ssu1g0703 1 15693290 15703572 Ssu5g2526 5 69270516 69280156 PCT