Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0658 ATGTTGCAGCAGTCACAACCTCAGCAGATTTTTGGAAATAATCAAGAGAATCAGCATTCACCACAATCTCAGCCACAAACTCAGGCTCATCTTCAGCAACATCTACAACATCAACACTCATTCAATAGTCAGCATCATCGTCATCACCACCAGCAACAACAACTACAACAGACACAGCAGCAACAGCAACAGCAAGTGGTAGATAATCAGCAGATTTCCAGTGCAGTCTCTACAATGTCTCAGTTTATTTCTGCACCTCAACCTCAATCCCCACCTGTGCAAGCTATCTCTTCCCTGTGCCAACAGCAAAATTTTTCTGATACAAATGGGAACCCTGTGACTACTATTGTTTCTCCCCTGCACAGTATCTTGGGTTCATTTCCCCAGGATGAAACATCTCAGCTCCTGAACCTTCCTAGAACAAGCTCTTGGATTCCTGTTCAAAATTCAAGTGCGTGGCCCTCGAAGCGTGTTGCAGTGGATCCTCTCCTTTCTTCTGGAGCGTCTCAATGTGTTCTACCTCAGGTGGAGCAGCTAGGGCAGCCACAGAGTACCATGTCTCAAAATGCTATTACTTTACCACCTTTTCCTGGAAGGGAGTGCTCAATAGACCAAGAAGGGAGCAATGATCCACAAAACCATCTCTTATTTGGTGTTAATATAGAGCCCTCTTCCCTTCTCATGCCTAATGGGATGTCAAGCCTTAAGGGGGTCAGCGGTAACAATGACTCCTCATCCTTGCCGTATCAATCTTCTAATTATCTGAATACCACCACAGGCACTGATTCTTCATTGAATCACGGATTGACACACAGCATACACGAATCGGGTTTCCTGCAGAGTCCAGAAAATGCAGGACAAGGAAACCCACTGAACAAAACCTTTGTGAAGGTTTATAAGTCAGGGTCCTTTGGAAGGTCATTGGATATCACTAAATTCAGCAGCTATCATGAGCTGCGCAGTGAGCTTGCTCGAATGTTTGGCCTCGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAACGATGTTCTTCTCCTTGGTGATGGCCCCTGGCCGTAA 1086 0.4613 MLQQSQPQQIFGNNQENQHSPQSQPQTQAHLQQHLQHQHSFNSQHHRHHHQQQQLQQTQQQQQQQVVDNQQISSAVSTMSQFISAPQPQSPPVQAISSLCQQQNFSDTNGNPVTTIVSPLHSILGSFPQDETSQLLNLPRTSSWIPVQNSSAWPSKRVAVDPLLSSGASQCVLPQVEQLGQPQSTMSQNAITLPPFPGRECSIDQEGSNDPQNHLLFGVNIEPSSLLMPNGMSSLKGVSGNNDSSSLPYQSSNYLNTTTGTDSSLNHGLTHSIHESGFLQSPENAGQGNPLNKTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0658 361 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 361 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ssu1g0658 361 MobiDBLite consensus disorder prediction 53 71 - -
Ssu1g0658 361 Gene3D - 290 361 - -
Ssu1g0658 361 PANTHER AUXIN RESPONSE FACTOR 1 361 - -
Ssu1g0658 361 ProSiteProfiles PB1 domain profile. 293 361 IPR000270 GO:0005515
Ssu1g0658 361 MobiDBLite consensus disorder prediction 1 71 - -
Ssu1g0658 361 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0658 Ssu-Chr1 14838536 14839709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0658 61 361 B3 DNA Binding Superfamily AT1G30330 63.125 6.94e-107 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0658 - - gmx:100798719 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0658 1 14838536 14839709 Ssu1g0658 1 14838536 14839709 ECH