Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0641 ATGATTGATAGtgGTGTGTGGCCAGACTCAAAGAGCTTCAATGATGAAGGGATGGAGCCTGTTCCAACAAAATGGAAAGGAGTGTGTGAAAATGGAACTGCTTTCGATTCGTCTCAATGTAACAGAAAGATCATTGGAGCTCGTTACTACCTGCAAGGTTATCAAAGTGCATTTGGCCCTCTAAACGAAAAGGAAGATTATAAATCGGCACGTGACAAAGATGGTCATGGAAGTCACACAGCTTCAATAGTTGCGGGGCGTGCAGTTCCCAATGCCTCAGCCCTTGGAGGCTTTGCTAAGGGCACGGCCCTAGGAGGGGCCCCTTTGGCCCGCCTTGCCATATACAAAGCGTGTTGGCCAATTAAGGGACAGTCAAAACATGAAGGGAACATATGCACAAACATTGACCTTCTCAAAGCAATAGATGATGCAATTGGTGATGGCGTTGATGTTTTAAGCATTTCCATTGGGTTCAGTGCGCCAATACCTTATGAGGAGGATGTGATTGCTAGGGGCGCATTGCATGCTGTAAGGAAGAACATTGTGGTAGTGTGTAGTGCTGGCAACTCTGGCCCTTTACCTCAAACTTTGTCAAACCCTGCACCATGGATTATCACTGTTGGTGCTAGCACTGTGGACCGTTCCTTTATTGCTCCAATTAAGCTAAGCAATGGCACAATTATTGAGGGTCGATCAATTACTCCACTCCACATGGGAAACAGATTCTACCCATTGGTTCTCGCTAGTGATGTTGAACATCCAGGCTTGCCTTGTAAAGATTCTGGGTATTGTCTGGACAATACCCTTCAATCCAACAAGGTAAGGGGGAAGATAGTTCTCTGCCTGAGAGGGCAAGgggaaagattaaaaaagggCTTAGAAGTTCAAAGGGCTGGTGGGGTTGGTTTTATCCTTGggaacaataaaaaatatgggAATGATATACCCTCTGATCCTCATTTTATTCCAGCCACTGGGGTGTCCTATGAGAATGCCTTAAAACTTATTCACTATGTCCATTCTACTCCAAATCCAATGGCACAAATTCTACCAGGAACAACAGTGTTAAAAACCAAACCAGCACCCTCCATGGCCTCCTTCTCTAGCAGGGGTCCAAATATAGTTGACCCCAATATTCTGAAGCCTGACATTACAGCTCCAGGAGTAGACATATTGGCAGCATGGACCGCTGAAGATGGCCCCACACGAATGACATTTCACGACAAACGAGTGGTTAAATACAACATCTTCTCTGGAACTTCAATGTCATGCCCTCATGTTGCTGCTGCAGCTGTTCTTCTCAAAGCCATACACCCTACTTGGAGCACTGCTGCTATAAGATCTGCCCTCATGACTACAGCCATGACAACAGACAACACTGGCAATCCATTGACTGACGAAACTGGAAATCCGGCCACACCATTCGCAATGGGGTCTGGTCATTTTCACCCCAAAAGAGTAGCAGATCCTGGTCTGGTTTATGATGCCTCCTACAAGGACTACCTTCTTTACACTTGTAGCCTTGGAGTGACTCAAAACttcaacattatatataaatgtccAAAGTCATTTCCTGAACCGTTTGAGCTCAACTATCCATCCATACAAGTCCACAGACTCAATTACACTAGGACTATTAAGAGGACAGTCACCAATGTTGGTAGGGGCAGGGATGTTTACAAGTTTAGTGCTGTGTCACCAAAGGAATACTCCATCACAGCCACTCCAAACATTCTGAAATTTAATCATGTTGGTCAGAAAATGAACTTCATTATCACAGTGACAGCACACTGTGGTCAGATACTAACCAAGCATGGTCCCGATAAGTACTATTTTGGATGGTATGCATGGACCCATGAGCATCACGTTGTAAGAAGCACAGTGGCAGTGTCTTTTCCATAA 1902 0.439 MIDSGVWPDSKSFNDEGMEPVPTKWKGVCENGTAFDSSQCNRKIIGARYYLQGYQSAFGPLNEKEDYKSARDKDGHGSHTASIVAGRAVPNASALGGFAKGTALGGAPLARLAIYKACWPIKGQSKHEGNICTNIDLLKAIDDAIGDGVDVLSISIGFSAPIPYEEDVIARGALHAVRKNIVVVCSAGNSGPLPQTLSNPAPWIITVGASTVDRSFIAPIKLSNGTIIEGRSITPLHMGNRFYPLVLASDVEHPGLPCKDSGYCLDNTLQSNKVRGKIVLCLRGQGERLKKGLEVQRAGGVGFILGNNKKYGNDIPSDPHFIPATGVSYENALKLIHYVHSTPNPMAQILPGTTVLKTKPAPSMASFSSRGPNIVDPNILKPDITAPGVDILAAWTAEDGPTRMTFHDKRVVKYNIFSGTSMSCPHVAAAAVLLKAIHPTWSTAAIRSALMTTAMTTDNTGNPLTDETGNPATPFAMGSGHFHPKRVADPGLVYDASYKDYLLYTCSLGVTQNFNIIYKCPKSFPEPFELNYPSIQVHRLNYTRTIKRTVTNVGRGRDVYKFSAVSPKEYSITATPNILKFNHVGQKMNFIITVTAHCGQILTKHGPDKYYFGWYAWTHEHHVVRSTVAVSFP 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0641 633 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 630 IPR045051 -
Ssu1g0641 633 Pfam PA domain 244 335 IPR003137 -
Ssu1g0641 633 SUPERFAMILY Subtilisin-like 2 492 IPR036852 GO:0004252|GO:0006508
Ssu1g0641 633 Pfam Subtilase family 49 480 IPR000209 GO:0006508|GO:0008236
Ssu1g0641 633 CDD Peptidases_S8_3 1 454 IPR034197 -
Ssu1g0641 633 Gene3D Peptidase S8/S53 domain 1 501 IPR036852 GO:0004252|GO:0006508
Ssu1g0641 633 SUPERFAMILY PA domain 271 341 IPR046450 -
Ssu1g0641 633 PRINTS Subtilisin serine protease family (S8) signature 72 85 IPR015500 -
Ssu1g0641 633 PRINTS Subtilisin serine protease family (S8) signature 418 434 IPR015500 -
Ssu1g0641 633 ProSiteProfiles Serine proteases, subtilase domain profile. 1 488 - -
Ssu1g0641 633 Gene3D - 504 632 - -
Ssu1g0641 633 Gene3D - 213 356 - -
Ssu1g0641 633 ProSitePatterns Serine proteases, subtilase family, serine active site. 419 429 IPR023828 -
Ssu1g0641 633 CDD PA_subtilisin_like 220 349 - -
Ssu1g0641 633 Pfam Fibronectin type-III domain 529 630 IPR041469 -
Ssu1g0641 633 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 2 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0641 Ssu-Chr1 14569982 14578185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0641 1 632 Subtilisin-like Serine Gene Family AT5G45650 58.648 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0641 - - gmx:100793064 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0641 1 14569982 14578185 Ssu1g0641 1 14569982 14578185 ECH