Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0579 ATGAAGAGCCCCGTGGAGGAGAGATTCTCCGAGTTCTACGAGAAGTGGGTTTGGAAGCTGGAGGAGATCCTCCACCAGCTTCTCGAGGTGTCCAAGCAGAGAAGCGAGGCGGCGAAGACTGAGCAAGAGCTGCAAGCGCTGGTGTCCAGGGTCACATCCCATTTGAAGGAGTATTACACCGTGAAATGGGCTGCGGCACGCGAAGACGTTCTGGTGTTCTTTTCGCCGGCGTGGCTGAGTCCTCTGGAGAGTGCTTACCTGTGGATGACGGGTTGGAAGCCCTCCATGGCGTTCAGGCTGCTGGAGTCTCTGAAGAAGCCGAACGCCTTTGCGATGACGGAGGAGCAGGAGAGGAAGGCGGAGGAGCTGAGGGTGAGGATAAGGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAGCAGGTGGCCATGGCTGACCGCAAGATGGTGGAGTTGGTGAAGCTCTCGAGCCGAGCGAGGAATGGCACTAGTGGTGTTGATGGGGTGGATGCGGTGGTGGAAGTGGCCTTGAAGGGGGTTCTTGCCGGCTTGGAGAGGGTCATGAAGGCTTCGGATTGCGTGAGGCTCAAGACACTCAAGGGGGTGTTGGATGTGCTTAGTCCAATGCAGTGTGTGGACTTCTTGGCTGCCAATATAGCTATGCAGCTGCGCCTCAGGCAATGGGGTAAGAAGAGGGACATGGCTGGCTCCATACTCCAAGTGAATCAGGACAAGTGA 741 0.5709 MKSPVEERFSEFYEKWVWKLEEILHQLLEVSKQRSEAAKTEQELQALVSRVTSHLKEYYTVKWAAAREDVLVFFSPAWLSPLESAYLWMTGWKPSMAFRLLESLKKPNAFAMTEEQERKAEELRVRIRMEEEKVEREMERQQVAMADRKMVELVKLSSRARNGTSGVDGVDAVVEVALKGVLAGLERVMKASDCVRLKTLKGVLDVLSPMQCVDFLAANIAMQLRLRQWGKKRDMAGSILQVNQDK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0579 246 Pfam Seed dormancy control 33 102 IPR025422 GO:0006351|GO:0043565
Ssu1g0579 246 PANTHER - 1 234 - -
Ssu1g0579 246 Coils Coil 30 50 - -
Ssu1g0579 246 ProSiteProfiles DOG1 domain profile. 6 236 IPR025422 GO:0006351|GO:0043565
Ssu1g0579 246 Coils Coil 113 149 - -
Ssu1g0579 246 PANTHER PROTEIN DOG1-LIKE 4 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0579 Ssu-Chr1 12926542 12927282 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0579 36 227 bZIP Transcription Factor Family AT5G06960 27.604 2.76e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0579 - - gmx:100808459 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0579 1 12926542 12927282 Ssu1g0579 1 12926542 12927282 ECH