Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0553 ATGGCAGCACGGGTTTGCGCAACGCAGAGGTTTGCAGACGGCGTGAGGTATTGGGCCACACAGAGGTTTGTTAACGATACGTGGTTTGTGCGATGTGGAGgTGAAAAGATATCACCAATAGAAGTGGATGTTGTCCTTCTTTCACATCCAGACATTGCTCAGGCAGCTGCTTTCGGAGTGCCTGATTACAAGTATGGGGAAGAGaacaacacaaaacagaacAGAATAAAAGGGTTTTTACCAGCTACACAGTGCTGGAAGCGGAAGCCCATAAACCAGCTAGTGTCGAAGCAGAAGGCTAAGAGACTGGCGCTTGAAACGGAAGCCCAGAACAGTGGCTGTTGA 345 0.4696 MAARVCATQRFADGVRYWATQRFVNDTWFVRCGGEKISPIEVDVVLLSHPDIAQAAAFGVPDYKYGEENNTKQNRIKGFLPATQCWKRKPINQLVSKQKAKRLALETEAQNSGC 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0553 114 SUPERFAMILY Acetyl-CoA synthetase-like 30 67 - -
Ssu1g0553 114 Gene3D - 30 110 IPR045851 -
Ssu1g0553 114 PANTHER ACYL-COA SYNTHETASE 30 71 - -
Ssu1g0553 114 PANTHER OXALATE--COA LIGASE-LIKE 30 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0553 Ssu-Chr1 12383716 12396284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0553 29 94 Monolignol Biosynthesis Gene Families AT1G20480 31.579 1.32e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0553 K22133 - zju:107429892 70.4774