Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0531 ATGGAGGAAATCCGCGGAAGGATACATCACAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTAGGTAGTTATGAACTTAGCAAAGCTAATTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCATGGGAAAGCCGTGTCCCCAGCTTATCCGTTAACCTGAAGAAACCTCAGCATAAGCAGTCAAGCAAGACTCAGAAGGATAAGAACACATCAACACCTAAAACTCCTGTCTTAGTTAAACCTCCTTCGGCCAATGCAAAAGGGACTTCAAAGGCTAGGAGATTGTCTTATCCACCAACTGAGAAAACTGTGGTTCAAGGAGTGCAATGA 396 0.4773 MEEIRGRIHHREEAAVKRERAMAYAFSHQWRANSSQSQLLGSYELSKANWGWSWKERWIAARPWESRVPSLSVNLKKPQHKQSSKTQKDKNTSTPKTPVLVKPPSANAKGTSKARRLSYPPTEKTVVQGVQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0531 131 MobiDBLite consensus disorder prediction 70 131 - -
Ssu1g0531 131 PANTHER IQ-DOMAIN 5-RELATED 1 123 - -
Ssu1g0531 131 PANTHER IQ-DOMAIN 9 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0531 Ssu-Chr1 11856205 11856680 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0531 2 120 IQD Protein Family AT2G33990 56.098 6.92e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0531 - - gmx:100786185 235.728