Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0527 ATGGAGAGGGAGATGCTAATGTTTGTTATATTCGTAGGGCTATGTTGTTTTGAAAGAAGTTACTTTGCATCAGGAATGGGTTCAGGTGTTTGGTTTAAGACAATTATTAGCTTAAGAAAATCTAAAGAAGGCAGGTCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATACAGGAAAAGAGTCTAGTGGTTTAGCAAATggtattaaaagtgaaaacctTGTGTCAGCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAAGCTTTACGTCGTATGAAAGGGTTTACAAAACTGAAGATCCTAACAGAAGGTTTCTCCGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCATTCATGGAGCAAGATACAGGCTGAGATTAGAGATCGCCGAATCTGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAGGCAAAACTTCATGATCTCGAGGTTGAATGGTGTGGTGGTTCTGAAACCATGGAGGAAATCCTCGGAAGGATACATCACAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTAGGTAGTTATGAACTTAGCAAAGCTAATTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCATGGGAAAGCCGTGTCCCCAGCTTATCCGTTAACCTGAAGAAACCTCAGCATAAGCAGTCAAGCAAGACTCAGAAGGATAAGAACACATCAACACCTAAAACTCCTGTCTTAGTTAAACCTCCTTCGGCCAATGCAAAAGGGACTTCAAAGGCTAGGAGATTGTCTTATCCACCAACTGAGAAAACTGTGGTTCAAGGAGTGCAATGA 969 0.4211 MEREMLMFVIFVGLCCFERSYFASGMGSGVWFKTIISLRKSKEGRSKKAKGILAQEKLNASKSNNYTGKESSGLANGIKSENLVSAGVSVETIAATRIQTAFRAYKARKALRRMKGFTKLKILTEGFSVKKQASTAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCGGSETMEEILGRIHHREEAAVKRERAMAYAFSHQWRANSSQSQLLGSYELSKANWGWSWKERWIAARPWESRVPSLSVNLKKPQHKQSSKTQKDKNTSTPKTPVLVKPPSANAKGTSKARRLSYPPTEKTVVQGVQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0527 322 PANTHER IQ-DOMAIN 5-RELATED 26 314 - -
Ssu1g0527 322 MobiDBLite consensus disorder prediction 262 322 - -
Ssu1g0527 322 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Ssu1g0527 322 PANTHER IQ-DOMAIN 9 26 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0527 Ssu-Chr1 11815190 11829051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0527 26 311 IQD Protein Family AT2G33990 53.793 1.73e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0527 - - gmx:100786185 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0527 1 11815190 11829051 Ssu1g0527 1 11815190 11829051 ECH