Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0515 ATGGAGTACTCAATGTTGAAAATGATACTAGCGCTGGCCATAATGCCATGGTATTGTTCACTTGCTGTGGACACTAGTCTAGTGAGGCAAGTGGCAGCTAAGTATAATGTGTCTTGCATCCTAGTTTTTGGAGATTCAAGTGTTGATTCTGGCAACAACAATGCCCTTCACACCACAATGAAAAGCAACTTCCCTCCTTATGGAAAGGACTTCTTTGACAGCCGCCCAACAGGAAGGTTTAGTAACGGGAGACTTGCCACGGACTTCGTtgCTGAAGCAGTGGGGTACAGAAAAGTGATTCCCCCTTTTCTTGACCCAAATTTGAAGCAGGAAGATCTGCCATATGGTGTTAGTTTTGCATCAGCAGCCACAGGTTTTGATGATTATACTGCTGAAGTTTCGAATGTTTTGCCTGTTTCCAAACAGCTCGAGTATTTTGAGCATTATAAGATCCACTTGAGAAAATTGGTGGGTGAAGCAAGGGCAGAATTCATTACAAGAAACGCCTTGTATATAATCAGTATGGGTACAAATGACTTTCTGCAGAATTATTTCTTGGAACCTACCCGCCCCAAGCAATTCAGCTTGCAAGAATTTGAGACTTTCTTGCTCTCCCGCTTCTCTAAGGACATTGAGGCAATGCATAGAATGGGTGCCAAGAGGTTGATCGTTGTAGGGGTCCTACCTCTGGGATGCGTTCCACTTGTCAAGACAATTAGGAACCAGGAAAGCTGTGTTAAACCTCTGAACGACGTAGCTTACTCATTCAATGCAAAATTATTACagcaattaaacaatttaaagacAAAGGTGGGCCTACAGGCTGCTTTGGTTGATGTTTATGGTATGATCCAAAATGCGGTGACGAACCCTAAAAAATACGGATTTATCGAAGGTTCAAAAGGATGTGTTGGGACGGGGACAGTAGAATATGGGGATTCATGCAAAGGGGCGAGTACTTGTTCAGATCCAGACAAATATGTATTCTGGGATGCTGTTCATCCAACGCAGAAGATGTACAAGATCATAGCTGATGAGGCCATTGaatcttttcttaaagaattcTTTTGA 1071 0.4164 MEYSMLKMILALAIMPWYCSLAVDTSLVRQVAAKYNVSCILVFGDSSVDSGNNNALHTTMKSNFPPYGKDFFDSRPTGRFSNGRLATDFVAEAVGYRKVIPPFLDPNLKQEDLPYGVSFASAATGFDDYTAEVSNVLPVSKQLEYFEHYKIHLRKLVGEARAEFITRNALYIISMGTNDFLQNYFLEPTRPKQFSLQEFETFLLSRFSKDIEAMHRMGAKRLIVVGVLPLGCVPLVKTIRNQESCVKPLNDVAYSFNAKLLQQLNNLKTKVGLQAALVDVYGMIQNAVTNPKKYGFIEGSKGCVGTGTVEYGDSCKGASTCSDPDKYVFWDAVHPTQKMYKIIADEAIESFLKEFF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0515 356 CDD SGNH_plant_lipase_like 39 348 IPR035669 -
Ssu1g0515 356 SUPERFAMILY SGNH hydrolase 169 350 - -
Ssu1g0515 356 Pfam GDSL-like Lipase/Acylhydrolase 40 346 IPR001087 GO:0016788
Ssu1g0515 356 PANTHER GDSL ESTERASE/LIPASE EXL3 18 352 - -
Ssu1g0515 356 PANTHER GDSL ESTERASE/LIPASE 18 352 - -
Ssu1g0515 356 Gene3D SGNH hydrolase 25 353 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0515 Ssu-Chr1 11524440 11529275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0515 40 349 Pollen Coat Proteome AT1G75910 34.494 5.82e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0515 - - gmx:100812614 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0515 1 11524440 11529275 Ssu1g0515 1 11524440 11529275 ECH