Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0497 ATGTCGTCCGATGGAGGATTTGACAACTCTTGCCCTGTCACGGGCACCATAGATGCCATCTTTGCtacaatttgtttaaatttgaaagttttggGAGAGCTAGTATTGCATATTTTAAATGATGAAGAGTGCATTAAGGTCCTGAAGAAATGCAGAGAAGCTATTTCAAACAAGGGCAAGGAAGGAAAAGTAATTATCATAGACATAGTGATCGGcgaaaagaatgaaaatcacGAATGGACAGAAACAAAGctgtttttttatatgttaatgaTGGCTCAAGTCaatggaagagagagagaagaaaaagaatgggaGAAACTCTTCTTGGAAGCTGGATTCAAGCATTACAAGATAACGCCCATCTTTGGTTTGAGGTCGCTTATTGAAGTTTATCCTTGA 402 0.3109 MSSDGGFDNSCPVTGTIDAIFATICLNLKVLGELVLHILNDEECIKVLKKCREAISNKGKEGKVIIIDIVIGEKNENHEWTETKLFFYMLMMAQVNGREREEKEWEKLFLEAGFKHYKITPIFGLRSLIEVYP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0497 133 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 132 IPR029063 -
Ssu1g0497 133 PANTHER O-METHYLTRANSFERASE 33 133 IPR016461 GO:0008168
Ssu1g0497 133 Gene3D Vaccinia Virus protein VP39 7 133 IPR029063 -
Ssu1g0497 133 PANTHER O-METHYLTRANSFERASE 33 133 - -
Ssu1g0497 133 Pfam O-methyltransferase domain 34 115 IPR001077 GO:0008171
Ssu1g0497 133 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 133 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0497 Ssu-Chr1 11145289 11147587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0497 30 133 Monolignol Biosynthesis Gene Families AT1G51990 37.963 5.96e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0497 K22588 - qsu:112018723 167.933