Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0433 ATGATCAGACACAAGCACACCCCCGCTCTTCCACCTCTTGTTCTCTTAATTGTTGTCTTTTTCAACTCAGCATGCGCTATTGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTGTTGCTCTTTGGCAATGCCACGATCGACTCTCGAATTCTAACACTCACCCACCAGCAAACGTTCTCGGTCGGTCGCGCCTTGTACCGTGAAAAAATCCCCACCAAGAAACCAAACTCTTCGTACGTGTACCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCTTATGAGGACACTCTTCCGGGGCACGGCTTAGTTTTCATCTTCACACCTGTCACAGGCATCCGCGGCACAAGTTCTGCACAGCACCTTGGTCTGTTCAACCTCACCAACAACGGAAACGCAAGCAACCACGTGTTTGGTGTCGAGTTCGATGTGTTCATGAACCAAGAGTTCGATGACATCAACGCCAACCATGTGGGGATTGACATAAACTCTCTCAAGTCTTATGTTTCCCATGATGCTGGGTATTGGCCACATGATGGTGACAAGTCCTTGAAGGAGTTGACGCTTAACGATGGTGAGAATTACCATGTTTGGATCGACTATGAAGATTCTTGGATTAATGTTACCATGGCGCCTGTGGGTATGAAAAGGCCTAGCAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTCAGGTTTTTGAGGATGAAATGTTTGTGGGGTTTACTAGTGCTACTGGTCAATTAGTGGAGAGTCACAAGATTTTGGGTTGGAGTTTCAGTAATGAGAATTTTTCGTTGAGTGATGAACTTGTTACTACTGGGTTACCTTCTTTTGTTCTTCCAAAGGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTACCGTTGGAGTTTTCTTAGTTATTTGTGCCTTGGTTTTGTTGGTACTGTTTTTGATTCAGCAGAAGCGTAGGAGAATGAAGAAGAGGCAGGAAATGGAAGATTGGGAGTTAGAGTATTGGCCACACAGAATGGCATATGAAGAAATTGAGGCTGCAACAAAGGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAACGGGAAAGTCTACAAGGGTGTTTTACGGGGAGGGGTGGAGGTTGCTGTGAAGCGCATTTCTCATCAAAATGATGGGGTGAGAGAGTTTCTTGCAGAAATTTCAAGCCTTGGGAGACTGAAGCAAAGGAATTTGGTGGGGTTGAGAGGTTGGTGCAAGAGAGATGTTGGGAATTTCTTGTTAGTTTATGACTACATGGAAAACGGGAGCTTGGACAAGAGGGTGTTTGATTGTGATGATGAGAGCAACATTTTAAGTTATGAAGATAGGATAAGGATTATTAAAGATGTGGCTTTTGCAGTCTTGTACTTGCATGAGGGGTGGGAAGCCAAGGTAGTGCACAGGGACATCAAGGCCAGCAATGTGTTACTGGATAAGGATATGAATGGAAGGCTTGGGGATTTTGGGTTAGCTAGAATGCACAGCCATGGTCAAGTTGCTAGCACCACAAAATTGGTTGGAACAGTGGGGTACATGGCTCCTGAAGTGATTAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGCATCTTGATTTTGGAGGTCTTGTGTGGAAGGAGACCTCTAGAAGAGGGTAAGCCACCTTTGGTGGAGTGGGTTTGGCAACTAATGGCACAAGGGCAACTTGTGTGTGCACTTGATGAAAGGCTAAGGGCAAAAGGAGAGTTTAGTGTGCAAGAATTGGAAAGGGTGCTACACTTGGCTTTGTTGTGTGCCTACCCTGAACCAAAGGCCAGGCCCACAATGAGACAAGTGGTGAACATTTTAGAGGGGAAGAACGAGGGAGATGAGTCAGAAATTGAGAATATGGATACTTATTTGCTACAACAGTTGAAATCAAGGGATATTTTGTCCGAGTATTCCCAATATTTTAGCTATGCATCACACCCAACTTTTCAAGATATTCGTCACTCTTCCTCAACGTCTCTCGCTTGGTCCAAATCTATAGTTGAGGGTAGGTGA 2058 0.4495 MIRHKHTPALPPLVLLIVVFFNSACAIDFVFNGFNSSEVLLFGNATIDSRILTLTHQQTFSVGRALYREKIPTKKPNSSYVYPFSTSFIFAMAPYEDTLPGHGLVFIFTPVTGIRGTSSAQHLGLFNLTNNGNASNHVFGVEFDVFMNQEFDDINANHVGIDINSLKSYVSHDAGYWPHDGDKSLKELTLNDGENYHVWIDYEDSWINVTMAPVGMKRPSRPLLNVSLNLSQVFEDEMFVGFTSATGQLVESHKILGWSFSNENFSLSDELVTTGLPSFVLPKDSIFKSKGFVAGFTVGVFLVICALVLLVLFLIQQKRRRMKKRQEMEDWELEYWPHRMAYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEVAVKRISHQNDGVREFLAEISSLGRLKQRNLVGLRGWCKRDVGNFLLVYDYMENGSLDKRVFDCDDESNILSYEDRIRIIKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVIKTGRASTQTDVYMFGILILEVLCGRRPLEEGKPPLVEWVWQLMAQGQLVCALDERLRAKGEFSVQELERVLHLALLCAYPEPKARPTMRQVVNILEGKNEGDESEIENMDTYLLQQLKSRDILSEYSQYFSYASHPTFQDIRHSSSTSLAWSKSIVEGR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0433 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 14 675 - -
Ssu1g0433 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 269 IPR013320 -
Ssu1g0433 685 Gene3D Transferase(Phosphotransferase) domain 1 428 638 - -
Ssu1g0433 685 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Ssu1g0433 685 SUPERFAMILY Protein kinase-like (PK-like) 328 622 IPR011009 -
Ssu1g0433 685 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Ssu1g0433 685 PANTHER - 14 675 - -
Ssu1g0433 685 SMART serkin_6 352 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0433 685 Pfam Protein kinase domain 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0433 685 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
Ssu1g0433 685 Coils Coil 314 334 - -
Ssu1g0433 685 CDD STKc_IRAK 358 623 - -
Ssu1g0433 685 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Ssu1g0433 685 ProSiteProfiles Protein kinase domain profile. 352 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0433 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Ssu1g0433 685 Gene3D - 25 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0433 Ssu-Chr1 9969860 9971917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0433 22 574 Receptor kinase-like Gene Family AT4G04960 67.504 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu1g0433 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0433 - - gmx:100804391 1234.55