Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0337 ATGGAGTTTGATCTTGAAGACTCACTAGCCAGCTTCAAAGAAGAGCAAACCTTTATTATAACTGAACTCTTTGCCTCCGAATCTGATCATATGCCCTCACCAAACTGCTTAAGTTCAACACATTTTCACGTTTTCTGTTGTGAAGCCATATCTCTCATACTTCAGGTTCAGCTTTCTTGCAATTTGGATCCATTTGTAGCCTACCTTGCTATAAATTACTTGCACCGTTTCATGTCAAGCCAAGAAATTCCGCAGGGGAAGCCGTGGTTTCTTAGGCTTGTTGTCATATCATGTCTTTCTCTTGCTTCGAAGATGAAGAACACAACATTACGATTTTTGGATATGCAGAAAGAAGGTTTCAATTTTGAGGTTCACAGTATTCAGAAAATGGAGCTTCTTATTCTGGGGGCTCTGAAATGGCGTATGAGGTCAATTacacctttttctttccttcatttctttatctctttagCTGAAATTAAAGACCAATCACTGAAGCAAGCACTTAAAGAGCGAGCTTCAGAGACAATCTTCAATGCTCAAAATGTCATTAAGCTCTTAGAGTATAAACCTTCAACTATTGCAGCAACTGCCCTGATTTTTGCATCTCATGAACTATTCCCGCAGCAATTTTCTATTCTGAGAGCTTCAATTACAGCCTGTGAGTACCTGGATGAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGGTTATGAGAATGCAAGCAAAGGATTTAATGATAGATACAAGCTTTTTAAGCACTGAAACTCCAGTGAGTGTGCTGGAGAGAAACACCAAACGACAAAGAATTTGA 819 0.3785 MEFDLEDSLASFKEEQTFIITELFASESDHMPSPNCLSSTHFHVFCCEAISLILQVQLSCNLDPFVAYLAINYLHRFMSSQEIPQGKPWFLRLVVISCLSLASKMKNTTLRFLDMQKEGFNFEVHSIQKMELLILGALKWRMRSITPFSFLHFFISLAEIKDQSLKQALKERASETIFNAQNVIKLLEYKPSTIAATALIFASHELFPQQFSILRASITACEYLDEETLSKCFDLMQEVMRMQAKDLMIDTSFLSTETPVSVLERNTKRQRI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0337 272 PANTHER CYCLINS 6 270 IPR039361 -
Ssu1g0337 272 SUPERFAMILY Cyclin-like 126 245 IPR036915 -
Ssu1g0337 272 Pfam Cyclin, N-terminal domain 19 142 IPR006671 -
Ssu1g0337 272 SMART Cyclin_C_2 145 266 IPR004367 -
Ssu1g0337 272 Gene3D - 33 143 - -
Ssu1g0337 272 CDD CYCLIN 49 135 IPR013763 -
Ssu1g0337 272 SUPERFAMILY Cyclin-like 12 142 IPR036915 -
Ssu1g0337 272 SMART cyclin_7 51 136 IPR013763 -
Ssu1g0337 272 Pfam Cyclin, C-terminal domain 145 241 IPR004367 -
Ssu1g0337 272 Gene3D - 22 234 - -
Ssu1g0337 272 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 6 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0337 Ssu-Chr1 8027947 8029264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0337 1 265 Core Cell Cycle Gene Families AT4G03270 41.429 8.04e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0337 K18812 - gmx:100799985 472.241