Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0327 ATGGCGGCGATGACGATCACCTTTTACgtgtttctcttcttctctttcctccGTTCCCACAGCCTGTTTTCTTTCGCAGCCAGTTCGAGGGTGAGGATCGCACCCGGTGACAGGATCAGGGACGAGGAGCGCGAGACATTGGTGTCGGACGGGCTCAACTTCGTGATGGGTTTCTTCGGTTTGGACAACTCCTCTTCCCGCTACGTTGGGATTTGGTACTACAACAATCCCGGACCAGCGGTTATATGGGTCGCAAACCGAGACAAACCCATCAACGGCACCGGGGGAGCCATCACTGTTGAGAATGACGGCAACCTGGTACTCCTCGATGGAGCCATGAACCAAGTCTGGTCCACCAACGTTTCCACTCACAGAAACTCCTCGGCACTGCTTCGCGACGACGGCAACCTCGTCCTCTCAAGCGAAAAGAAAGAGGTGTGGCAAAGCTTCGAGAATCCAACCGATACGTACGTGCCTGGTATGAAGGTGCCGGTGGGTGGGAAGAGTGTTAACTATGTCTTCACGTCATGGAAATCAGCCACGGATCCTTCAGAGGGAAACTACACTATGGGGGTGGATCCCGAGGGGTTGCCTCAGATAGTGGTCTGGGAGGGGGAAAAAAGAAGGTGGAGAAGTGGGTATTGGGATGGTAGATTATTTCAAGGGGTGTCTATGACGGGAAATTATTTCTATGGTTTTACGCTTAATGGGGATGGTAGAGGTGGTAGGTACTTTATATATAACCCGTTGAACGGCACTGACAAGGTGAGGTTTCAAATGGGGTGGGATGGGTACGAGAGGGAGTTTAGGTGGAATGGGGATGAGAAACGTTGGAGTGAGATTCAGAGAGGGCCTTCTCATGAGTGCGAGGTTTATAACAAGTGTGGGAGTTTTGCGGCGTGTGACGTGTCCGCTTCCGGTTCGCCTGTTTGTACTTGCGTACGAGGTTTTGAACCAAAGGATTGGGATAAGTGGGTTAAGGGGAACTGGTCGGGTGGGTGTACGAGGATGACCCCACTCAAGGCTGAGAGGAATGCCACTTCTGGGACTCGGGTTAGTGTTGGAGACGATGGGTTCTTGGATCGCAAGTCTATGAAGTTGCCGGACTTCGCACGTGTGGTTGGCACGAGTGACTGTGAGAGAGAGTGTTTGAACAATGCTTCCTGTACGGCGTACGCGGATGTTCTTGGAATAGGGTGTATGGTGTGGTACGGGGAGTTGGTTGATATTCAACATTTTGAAAGTGGAGGAACTACGTTGCACATCCGCCTCGCTGATTCTGATTTAGATGATGGAGGAAAAAAGAACAGGTTTGCGATAATAACAGGTGTTCTGGCGGGGTTAATCTGCCTAGGAATCTTTGTATGGCTCGTGTGGAGGTtcaagggaaaacttaaagtTCTGCCTACAGTTTCTTCAGCTTCTTGTTGCAAGAATAGTGATGTACTACCAGTCTTTGATGCAAGCAAGAGCAGAGACATGTCAGCAGAATTTTCAGGATCAGCTGATCTTAGCTTCGAGGGGAACCAACTAAGTGGACCAGAATTTCCACTTTACAATTTTAGTTGCATTTCAATAGCCACAAACAATTTCTCAGAAGAAAATAAGCTTGGACAAGGGGGCTTTGGTCCTGTCTACAAGGGAAAGCTTCCAAGCGGAGAACAAATAGCTGTTAAGAGGCTTTCAAGATGGTCTGGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTGCAACACAGAAATTTAGTTAGACTAATGGGTTGTTCTATTGAAGGGGAAGAGAAGTTGCTAGTATATGAATACATGCCAAACAAAAGCTTGGATTGCTTCTTATTTGATCCAGTCAAACAAACACAACTAGATTGGTCAAGACGCTTTGAAATCATTGAAGGCATTGCAAGAGGATTACTTTATTTGCACCGAGATTCAAGACTTAGAATAATTCATCGAGATTTAAAAGCGAGTAACATTTTGTTGGATGAAAACATGAACCCAAAAATATCAGACTTTGGCTTGGCCAGGATATTTGGTGGGAACCAGAATGAAGCCAATACAAACAGAGTAGTTGGTACATATGGTTATATGGCCCCTGAATATGCAATGGAAGGTCTGTTTTCAGTCAAATCTGATGTATATAGTTTTGGTGTATTACTACTAGAGATTTTGAGTGGCCGCAGAAACACTAGCTTTCGTCACTCAGATGACTCAAGTCTCATAGGATATGCGTGGCATCTTTGGAATGAACGCAGAGCAATGGAGCTTGTTGATCCTTGCATTCGTGATTCTAGTCCTAAAAACAAAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCAGCTCATAGACCAAACATGTCTGCTGTGGTGTTGATGCTGGAAAGTGAAGCAACTACTCTTCCCATGCCTACGCAACCTTTGATTACTTCCATGAGGAGATCTGAGGACAGAGAATTTTATATGGATGGCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTCGTAGGGAGATAG 2541 0.4557 MAAMTITFYVFLFFSFLRSHSLFSFAASSRVRIAPGDRIRDEERETLVSDGLNFVMGFFGLDNSSSRYVGIWYYNNPGPAVIWVANRDKPINGTGGAITVENDGNLVLLDGAMNQVWSTNVSTHRNSSALLRDDGNLVLSSEKKEVWQSFENPTDTYVPGMKVPVGGKSVNYVFTSWKSATDPSEGNYTMGVDPEGLPQIVVWEGEKRRWRSGYWDGRLFQGVSMTGNYFYGFTLNGDGRGGRYFIYNPLNGTDKVRFQMGWDGYEREFRWNGDEKRWSEIQRGPSHECEVYNKCGSFAACDVSASGSPVCTCVRGFEPKDWDKWVKGNWSGGCTRMTPLKAERNATSGTRVSVGDDGFLDRKSMKLPDFARVVGTSDCERECLNNASCTAYADVLGIGCMVWYGELVDIQHFESGGTTLHIRLADSDLDDGGKKNRFAIITGVLAGLICLGIFVWLVWRFKGKLKVLPTVSSASCCKNSDVLPVFDASKSRDMSAEFSGSADLSFEGNQLSGPEFPLYNFSCISIATNNFSEENKLGQGGFGPVYKGKLPSGEQIAVKRLSRWSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIEGEEKLLVYEYMPNKSLDCFLFDPVKQTQLDWSRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHSDDSSLIGYAWHLWNERRAMELVDPCIRDSSPKNKALRCIHIGMLCVQDSAAHRPNMSAVVLMLESEATTLPMPTQPLITSMRRSEDREFYMDGLDVSNDLTVTMVVGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0327 846 SMART blect_4 38 153 IPR001480 -
Ssu1g0327 846 SMART ntp_6 354 424 IPR003609 -
Ssu1g0327 846 Pfam PAN-like domain 355 410 IPR003609 -
Ssu1g0327 846 Gene3D Transferase(Phosphotransferase) domain 1 607 810 - -
Ssu1g0327 846 SMART serkin_6 531 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0327 846 ProSiteProfiles PAN/Apple domain profile. 354 425 IPR003609 -
Ssu1g0327 846 CDD B_lectin 45 153 IPR001480 -
Ssu1g0327 846 Pfam Protein tyrosine and serine/threonine kinase 534 799 IPR001245 GO:0004672|GO:0006468
Ssu1g0327 846 ProSiteProfiles EGF-like domain profile. 285 323 IPR000742 -
Ssu1g0327 846 PIRSF SRK 1 846 IPR024171 GO:0004674
Ssu1g0327 846 Pfam D-mannose binding lectin 81 178 IPR001480 -
Ssu1g0327 846 Gene3D - 24 150 IPR036426 -
Ssu1g0327 846 SUPERFAMILY Protein kinase-like (PK-like) 516 830 IPR011009 -
Ssu1g0327 846 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Ssu1g0327 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Ssu1g0327 846 ProSiteProfiles Protein kinase domain profile. 531 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0327 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 217 IPR036426 -
Ssu1g0327 846 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Ssu1g0327 846 CDD STKc_IRAK 537 802 - -
Ssu1g0327 846 Gene3D Phosphorylase Kinase; domain 1 503 606 - -
Ssu1g0327 846 CDD PAN_AP_plant 356 425 - -
Ssu1g0327 846 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 8 846 - -
Ssu1g0327 846 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 8 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0327 Ssu-Chr1 7721006 7724670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0327 505 814 Receptor kinase-like Gene Family AT4G23230 62.058 2.50e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu1g0327 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0327 - - gmx:102660295 1484.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0327 1 7721006 7724670 Ssu5g1792 5 53619458 53620741 PCT