Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0215 ATGGAGAGCTTCGCATTCCACTCCCTCTCAACCCCAACCTCCTTCTCTCGCTTTTCCCAACTGCATCATCGTCCTCGCCGTATCTCCCGATCCCAATTGAATCCCACCCCATCTCTCAGTCTCAGATCGCCCATCATCATCTCCCaacctttttttccctttcccttTCCCTCGAAACCCCATTACCCAATCCAAGCTTCTTCATCACCTCCTCCTCCACCCCCCTCAAAATCCCCACCAGCACCTCCTCTACAAGGCGCGAAGCCAATCCCCTTCGTCGTCTCCATATGCATCGGCCTCATTGTTCGCTTCGCGGTTCCGAAGCCGGTGGAGGTGACCCCGGAGGCCTGGCAGCTGCTCTCGATCTTCCTGTCCACCATTGCGGGCCTGGTTCTGAGCCCGTTGCCGGTCGGGGCGTGGGCCTTCCTGGGCCTGACGGCCTCCGTGGTGACCAAAACGCTGAGCTTCTCGGCGGCCTTCAGCGCGTTCACGAACGAGGTCATTTGGCTGATTGTGATCTCGTTCTTCTTTGCTCGCGGCTTTGTGAAGACCGGGCTGGGGGATAGGATTGCGACGTACTTCGTCAAGTGGATGGGAAAGAGCACGCTGGGCCTGTCTTATGGGCTGACATTCAGTGAGGTGCTTATTGCGCCGGCAATGCCTAGCACCACTGCCAGGGCCGGTGGGGTCTTCTTGCCCATTATTAGGTCCCTCTCACTCTCCGCCGGCAGTGAACCCGCCAGTCCCACGGCTAAGAGACTCGGGGCTTACCTCATTCAGAACCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCAGCAGCTCAAAATCTGCTGTGTATCAAATTAGCAGAAGAGCTTGGGGTGATAGTTTCAAACCCTTGGGTTACTTGGTTTAAGGCAGCTAGTTTACCTGCACTCGTTTGTCTTCTTGTTACACCATTGATTTTATACAAGCTTGATCCCCCTGAAATCAAAGACACACCAGAGGCTCCTGCCCTGGCTGCCAAGAAACTGGAGAGTATGGGCCCTGTCACTCAAAATGAATGGATTATGGTCGGTACAATGCTTCTTGCAGTGTCTTTGTGGATCTTTGGAGACACTATTGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTCCTATTAGGAGTCCTTGACTGGAATGACTGTTTGAATGAAAAACCAGCATGGGATACCTTAGCTTGGTTTGCCGTTCTGGTAGGTATGGCAGGCCAGTTGACAAACCTTGGTATTGTGAACTGGATGTCTGATTGTGTGGCCCACAACCTTCGGTCATTCTCTTTGAGCTGGCCGGCCTCACTAGCTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGGCATGTGGGGGCTTTATACTCTGCATTTCTTGCCATGCATAGAGCAGCTGGTGTTCCCGGTGTTCTGGCAGCGCTTGCTTTAGGTTATAACACAAATCTTTTTGGTGCAATAACACACTATAGTAGCGGCCAGGCTGCTGTATACTATGGAGGTTTGTCCCTCTCAATAATGTCATCTAATTTctgtgttttctatttttctttccagCTATATTATTATTTGGCATGTGTTGGTTCAGTAACTTACTTTGTTCAATTCCCTATGCTACAGTGGATAATATATATCCTTCTCTTAAACTACATGCATGTCAATTGTGTTTGGTTCTAA 1731 0.4905 MESFAFHSLSTPTSFSRFSQLHHRPRRISRSQLNPTPSLSLRSPIIISQPFFPFPFPSKPHYPIQASSSPPPPPPSKSPPAPPLQGAKPIPFVVSICIGLIVRFAVPKPVEVTPEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTASVVTKTLSFSAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIRSLSLSAGSEPASPTAKRLGAYLIQNQFQSAGNSSALFLTAAAQNLLCIKLAEELGVIVSNPWVTWFKAASLPALVCLLVTPLILYKLDPPEIKDTPEAPALAAKKLESMGPVTQNEWIMVGTMLLAVSLWIFGDTIGIASAVAAMIGLSILLLLGVLDWNDCLNEKPAWDTLAWFAVLVGMAGQLTNLGIVNWMSDCVAHNLRSFSLSWPASLAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGVLAALALGYNTNLFGAITHYSSGQAAVYYGGLSLSIMSSNFCVFYFSFQLYYYLACVGSVTYFVQFPMLQWIIYILLLNYMHVNCVWF 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0215 576 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 108 519 IPR001898 GO:0016020|GO:0022857|GO:0055085
Ssu1g0215 576 Pfam Sodium:sulfate symporter transmembrane region 93 527 IPR001898 GO:0016020|GO:0022857|GO:0055085
Ssu1g0215 576 MobiDBLite consensus disorder prediction 63 83 - -
Ssu1g0215 576 PANTHER DICARBOXYLIC ACID TRANSPORTER2 29 519 - -
Ssu1g0215 576 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 29 519 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0215 Ssu-Chr1 5246870 5250298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0215 1 518 Antiporters AT5G64290 74.621 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0215 - - gmx:100776794 861.292