Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0191 ATGGCGGAGGGTGCTTCTTGCGGATTGCGTCGTCCATTAGATATTcaacaattacaatttgaagcCCAGCATCGGTGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCATATCACATCAGAACCTCATAACAGGCCACCAAGTggttcactttttctttttgatcgGAAGGTTTTGAGATACTTTAGAAAGGATGGGCATaattggagaaagaaaaaagatggaaaaaCTGTGAAAGAAGCTCACGAAAAGTTGAAGGTTGGAAGTGTTGATGTGTTGCACTGTTACTATGCACATGGTgaagagaatgaaaattttcaaaggcGAAGCTATTGGATGCTTGAACTGGATATGATGCACATAGTATTTGTCCATTACTTGGAAGTTAAGgGTAACAAGACAAATATTGTAGTAAATACTGAAGGTGATGAGGTCCCATCAGATTCCCAAAAGGTCACTTCTCCATCGTCTAGCTTTCCCTCACATCATAGCGGTGTTCCTTCACTGAGTACAGATTCTGTGAGCCCAACAACCAGTTTGATGTCTTTACGTGAAGACGCTGATTCTGAGGATATCCACCAAGTAAGTTCTGGGTTGCGCCCATTACATGAGTCACAACATATGGGGAATGGTCCATTGACGGAAAAGACTGATGCTGGCAACCTCTGA 687 0.3741 MAEGASCGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLELDMMHIVFVHYLEVKGNKTNIVVNTEGDEVPSDSQKVTSPSSSFPSHHSGVPSLSTDSVSPTTSLMSLREDADSEDIHQVSSGLRPLHESQHMGNGPLTEKTDAGNL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0191 228 SMART CG_1_2 18 136 IPR005559 GO:0003677
Ssu1g0191 228 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 225 - -
Ssu1g0191 228 MobiDBLite consensus disorder prediction 146 184 - -
Ssu1g0191 228 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 225 - -
Ssu1g0191 228 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Ssu1g0191 228 MobiDBLite consensus disorder prediction 205 228 - -
Ssu1g0191 228 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0191 Ssu-Chr1 4978796 4985702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0191 1 212 CAMTA Transcription Factor Family AT5G64220 65.258 2.90e-85 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0191 K21596 - gmx:100780357 419.083