Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0183 ATGGCAAACCTTATTCAACCATGCCATGACCATGATCCAGCTGCATCCCCTAGCAAAGTCAAGGACCCTTCAAAGATGTTGAACTCGGACGTGGAAGGACAGGGAGAGGAGAAGGGTTTTGACTATGCCAAGAGGGCACAGTGGCTTAGAGCTGCTGTTTTGGGTGCCAATGATGGGTTGCTTTCAACAGCATCCCTCATGATGGGAGTTGGAGCTGTGAGAGAGGATGTTAAGACCATGATGCTAAGTGGAGTTGCGGGCTTGGTGGGTGGGGCCTGCAGCATGGCCATTGGAGAGTTTGTTTCTGTTTATTCACAGTATGATATTGAGCTGGCTCAGATGAAAAGAGAGGGAAATATGGATAAGAAAGACAAAGAGAAATTGCCAAACCCCTATTATGCAGCTTTTGCCTCTGCTCTAACGTTTGCCCTTGGGGCAGGGGTGCCACTGCTTGGTGCGGCCTTTGTCAAAAGCTATAAGGCAAGGTTGGGGGTGATGGTGGCTGTTGTGAGCCTTGCCTTGATTGTGTTTGGAACTTTGGGTGCCTACATAGGGAAAGCACCCATGGTGAAGTCCACTTCGAGGGTTTTGATTGGAGGATGGATGGCCATGGCAATTACTTTTGGTTTAACAAAGCTTGTAGATCATGTTGGAGTTTGA 660 0.4848 MANLIQPCHDHDPAASPSKVKDPSKMLNSDVEGQGEEKGFDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAVREDVKTMMLSGVAGLVGGACSMAIGEFVSVYSQYDIELAQMKREGNMDKKDKEKLPNPYYAAFASALTFALGAGVPLLGAAFVKSYKARLGVMVAVVSLALIVFGTLGAYIGKAPMVKSTSRVLIGGWMAMAITFGLTKLVDHVGV 219
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0183 219 MobiDBLite consensus disorder prediction 1 32 - -
Ssu1g0183 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 215 IPR008217 GO:0005384|GO:0030026
Ssu1g0183 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 16 215 - -
Ssu1g0183 219 Pfam VIT family 49 121 IPR008217 GO:0005384|GO:0030026
Ssu1g0183 219 Pfam VIT family 114 211 IPR008217 GO:0005384|GO:0030026
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g0183 Ssu-Chr1 4866919 4867578 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0183 27 219 Nodulin-like Gene Family AT3G43660 71.503 1.36e-93 270
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0183 K22736 - gmx:100811713 338.576