Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0180 ATGGCTTCTAGGAGATTGGTTACATTCATTTGCTCCATTGCTTTTGCAATATATTTCTTTGTCATCATTTTTCAAGTTCCCTTGTTCGGCGTTCCATGTAGATGTGGAATCTGCAAGACACCATTACAACTGATATCTTCTCACTTAATTGCAAGTGAGGTCTTTCCTCATTTTATAGTGAAGTCTCTTCTCTATCCCGGAGCTCTTACAACGGAATTTTACAACCAGAAAGCCACCCCAAGTTACAAAAATGTACTGAAGTCGTACAATTTCAATACAAGGGAATTCTCTTTTGTATTGGATCTCCAATGCCTAGAGGTTATAGTAGGAAGCTACTTGTCTGTGGCAGGAGCAATCACAGGTTTGATTAGACCAGGGAGAATGAGCATTTTTGGAATAGCTTTTCTTGTATACGGTGTAGGCCGACTGAGTCAGATGGAAATAGAGCAACTCTCTGACCTAACATGTATCCGTATGTATCCAGCCATGAACATTGCGCTATTCTCCGCATTATTCTCTCTGAATTTTTGTACCTGCACAATGCTCGGGATTTCTAATGTGCTTTGGACTGATGCTTCCACAAGAGGCATTGTTCAGAAATTCTTAGCCACGGGTCCCTTCAACGTGGAATTTGGCAAGTCTGTGGTGAAGATGGGCAACATTGAGTTGAAGACCGCTATAGATGGTGAAATTTGCAGGAAATGTTCTGTTCTTAATTAA 720 0.4083 MASRRLVTFICSIAFAIYFFVIIFQVPLFGVPCRCGICKTPLQLISSHLIASEVFPHFIVKSLLYPGALTTEFYNQKATPSYKNVLKSYNFNTREFSFVLDLQCLEVIVGSYLSVAGAITGLIRPGRMSIFGIAFLVYGVGRLSQMEIEQLSDLTCIRMYPAMNIALFSALFSLNFCTCTMLGISNVLWTDASTRGIVQKFLATGPFNVEFGKSVVKMGNIELKTAIDGEICRKCSVLN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0180 239 PANTHER TRANSMEMBRANE PROTEIN 2 174 - -
Ssu1g0180 239 Gene3D - 219 239 - -
Ssu1g0180 239 Gene3D Peroxidase, domain 2 181 218 - -
Ssu1g0180 239 ProSiteProfiles Plant heme peroxidase family profile. 181 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu1g0180 239 PANTHER TAIL FIBER 2 174 - -
Ssu1g0180 239 SUPERFAMILY Heme-dependent peroxidases 177 239 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0180 Ssu-Chr1 4811638 4813493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0180 181 239 Peroxidase AT5G64120 50.000 1.34e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0180 - - gmx:100791706 196.052