Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0101 ATGGCGGAGGTGCTGCAGCAAGGTCGCTCTCTGGCTGAGACACCAACATATTCAGTTGCCTCTGTTGTTACTGTCATGGTCTTTGTCTGCCTCCTGGTTGAGCGTTCAATCTACCGCTTTGGAGAGTGgttgaagaaaacaagaaggAAGGCACTTTTTGCTTCACTGGAGAAAATTAAGGAAGAGCTGATGCTGCTTGGGCTTATCTCTTTGTTGTTGGCACATAGTGCAAGGTGGATCTCTGAAATTTGTGTGAATTCATCACTTTTTACCAGTCGATTTTATATTTGTTCTGAACAAGACCTCCGCATGAATGAAAATATCAAGCATGAAAGCTCGTCCTCTTTCCCTGATGAAACTGCTATTCCTAAGGGACTAATTAGTGGTGCATTCAACCAATGTGGAGAGGGTCATGAACCATTTGTTTCATATGAGGGTCTTGAGCAGCTGCACCGGTTCTTATTTGTTCTCGGCATCACTCATGTTCTGTATAGTTGTCTGGCAGTTGGTTTAGCAATGAGCAAGATCTATAGTTGGCGCAGATGGGAAAATCAGGCTAAGATGGCAACCGATGGAAACCTGCAAGGAAAGAAAATCAAGGTGATGAGGCGGCAGACAACATTTGTTTTCCATCATACTTCTCATCCATGGAGCAGGAGTCCAATCCTAAACTGGATgCTCTGTTTTCTACGTCAGTTTAGGAGCTCTATACAAAAATCAGATTACCTTGCACTCCGTTTAGGTTTCATCACTGAACACAAATTGCCGTTGTCTTATAATTTCCATCAATATATGGTTCGAAGCATGGAAGATGAATTTCATGGCATTCTCGGAATAAGCTGGCCGCTTTGGATTTATGCCATAGTCTGCATCTTCGTGAACATCCATGGTCTGAATATATACTTCTGGCTATCATTTATCCCTGCAATTCTTGTCATGTTGATAGGGACAAAACTTCAACATGTTGTATCCACTTTAGCACTTGAAATTATGAAGCAGACAGGTCCATCTGCTCGGACACAAGTAAAGCCACGCGATGatcttttttggttcaaaaaacCGGATATACTGTTATGGCTGATACAATTTGTCATATTTCAGAATGCCTTTGAAATGGCGACGTTTATTTGGTCATTGTGGGGATTCCAGGAACAATCGTGCTACACGAGAAACCATTACATGGTCATCATTCGATTGGCGTCTGGTGCTCTTGTTCAATTCTGGTGTAGCTATATGACAGTGCCCCTGAATATAATAGTTTCACAGATGGGATCTCGATGTAAGAAGGCCTTGGTAGCGGAGAGTGTTAGAGAGTCCCTGCATAGTTGGTGTAAAAGAGTAAAACACAAGCCTAAGCATGATTCGTTGCATTCACACACCGCAAGATCAGTATGTTCCCTCGAATCAACAATTGATGAAAGGGACGAAATAACAGTAGTATCTGGTACTCTAACTCGAAGTTCATCCTTGGAGTTTTTGAATCAGATAACAGTGACTTCAGTAGACCAGCTGAACTTTGAGACTTCCAACAACCCAAAAGATTCAATCAAGTTGGCTGAGTATTTGTCTGAAGCTCTATATACTAATCCCCCACAACGGGCTTTCAATGGTGAAGACCGTGATGGCAACGGAGAGGAAGCAAAAGCTAACACTCTTCTTGATTTGTTTCAGAAAACATGA 1680 0.4143 MAEVLQQGRSLAETPTYSVASVVTVMVFVCLLVERSIYRFGEWLKKTRRKALFASLEKIKEELMLLGLISLLLAHSARWISEICVNSSLFTSRFYICSEQDLRMNENIKHESSSSFPDETAIPKGLISGAFNQCGEGHEPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRRWENQAKMATDGNLQGKKIKVMRRQTTFVFHHTSHPWSRSPILNWMLCFLRQFRSSIQKSDYLALRLGFITEHKLPLSYNFHQYMVRSMEDEFHGILGISWPLWIYAIVCIFVNIHGLNIYFWLSFIPAILVMLIGTKLQHVVSTLALEIMKQTGPSARTQVKPRDDLFWFKKPDILLWLIQFVIFQNAFEMATFIWSLWGFQEQSCYTRNHYMVIIRLASGALVQFWCSYMTVPLNIIVSQMGSRCKKALVAESVRESLHSWCKRVKHKPKHDSLHSHTARSVCSLESTIDERDEITVVSGTLTRSSSLEFLNQITVTSVDQLNFETSNNPKDSIKLAEYLSEALYTNPPQRAFNGEDRDGNGEEAKANTLLDLFQKT 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0101 559 MobiDBLite consensus disorder prediction 531 559 - -
Ssu1g0101 559 Pfam Mlo family 9 470 IPR004326 GO:0006952|GO:0016021
Ssu1g0101 559 PANTHER MLO-LIKE PROTEIN 4 6 526 - -
Ssu1g0101 559 PANTHER MLO-LIKE PROTEIN 1 6 526 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0101 Ssu-Chr1 3312421 3317144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0101 1 559 MLO family AT1G11000 64.957 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0101 K08472 - gmx:100801624 982.245