Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0097 ATGGACAAATACGAGCTGGTGAAGGATATAGGATCTGGGAATTTCGGGGTCGCTAGACTCATGCGTCACAAAGACACCAAGGAGCTTGTTGCCATGAAATTCATTGAACGGGGTCACAAGATTGATGAGAATGTTGCGAGGGAAATTATAAACCACAGAAGTCTTCGGCACCCAAATATTATTCGGTTCAAGGAGGTGGTTTTGACTCCCACGCATCTGGGTATTGTTATGGAGTATGCAGCTGGTGGAGAGCTCTTTGAGCGGATTTGCAGTGCTGGAAGATTCAGCGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGCCATCGAGACTTTGAAGCTGGAGAACACCTTATTGGATGGAAGCCCTGCCCCACGGCTCaagatttTTTTGCTTCTGataaccttttatttttccaGTCATCTCTGCTTCATTCTAGGCCTAAGTCAACAGTGGGAACTCCAGCCTACATTGCGCCAGAGGTTCTCTCACGTAGAGAATATGATGGAAAGTTAGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAAGACCAAGAGGATCCCAGAAATTTCAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGCAGACATCTGCTATCTCGCATTTTTGTGGCAAATCCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCACCCATGGTTTTTAAAGAACTTGCCTAGAGAATTAACAGAAGTAGCTCAAGCTGTCTACTACAGAAAAGAAAACCCAACCTATTCTCTTCAGAGTATAGAAGACATCATGAACATTGTTGGGGAGGCCAAGACTCCACCTCCGGCATCCAGGTCAATTGGAGGATTCGGCTGGGGaggagaagaggaggaggaggaaacaaaagaagaagCAGAGGCTGAGACGGAAGAGGATGAGTACGAAAAGAGAGTCAAGGAGGCACAGGCAAGCGGTGAATTTCATGTCAGTTAA 1071 0.4332 MDKYELVKDIGSGNFGVARLMRHKDTKELVAMKFIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDFEAGEHLIGWKPCPTAQDFFASDNLLFFQSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPRNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKENPTYSLQSIEDIMNIVGEAKTPPPASRSIGGFGWGGEEEEEETKEEAEAETEEDEYEKRVKEAQASGEFHVS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0097 356 MobiDBLite consensus disorder prediction 304 356 - -
Ssu1g0097 356 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Ssu1g0097 356 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Ssu1g0097 356 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 350 - -
Ssu1g0097 356 Coils Coil 321 350 - -
Ssu1g0097 356 Gene3D Transferase(Phosphotransferase) domain 1 80 272 - -
Ssu1g0097 356 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ssu1g0097 356 MobiDBLite consensus disorder prediction 319 337 - -
Ssu1g0097 356 ProSiteProfiles Protein kinase domain profile. 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0097 356 Pfam Protein kinase domain 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu1g0097 356 PANTHER SERINE/THREONINE KINASE 2 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0097 Ssu-Chr1 3279705 3283017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0097 3 267 CBL-interacting serine-threonine protein kinases AT4G24400 40.149 2.61e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ssu1g0097 Pkinase 2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0097 K14498 - gmx:100812259 601.668