Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0017 ATGGAGCTTAACCGCACTCCTTTCTCTATTTACTTCATTACCTCCATTCCCTTTCTcttcatgttatttatattagttcaGAGACCCGGTTCCGACAACTCCTCTTCCAATTTATCCCCAGGACCGAGGGCACTGCCTTTCATAGGGAACATTCACCAGTTAGTTGGCTCACTGCCTCATCAATGCTTAAAAAACTTGGCAGATAAGGATGGGCCGTTAATGCATCTAAAACTAGGAGAGGTATCCAACATCACAGTCACTTCACCAGAAATGGCCCAAGAGATTATGAAAACACATGATCTCAACGGTGCTAGCATTGCCTTCTCTCAGCCTGGAGATTATTGGAGGGTCCATTTCAACCTTTCTCAGAACATTTACCCATTCATTTATGGGATAGCTGCACGAGTGCCTCTTGGTAAAAAGAGTAGATGCCAACAAGTGTTCGTATCAAAGATTGAGGAACAATTGAAGCATGTAGCAGGAGAGACTGATAGGGTGTTGCAAGATATTAGCGACGaacacaaaaatagaaaaagcagCGAGTGTGAAGCAGTGCAAGATCTAGTTGATGTTCTTCTCAAGTTTAAACCGGATAAGGAAACAGAATGTCCCTTGATCGATGACAACATTAAAGGCGTCATCCagGTGTAG 651 0.4101 MELNRTPFSIYFITSIPFLFMLFILVQRPGSDNSSSNLSPGPRALPFIGNIHQLVGSLPHQCLKNLADKDGPLMHLKLGEVSNITVTSPEMAQEIMKTHDLNGASIAFSQPGDYWRVHFNLSQNIYPFIYGIAARVPLGKKSRCQQVFVSKIEEQLKHVAGETDRVLQDISDEHKNRKSSECEAVQDLVDVLLKFKPDKETECPLIDDNIKGVIQV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0017 216 PANTHER CYTOCHROME P450 71B11-RELATED 13 103 - -
Ssu1g0017 216 PANTHER CYTOCHROME P450 71B11-RELATED 151 214 - -
Ssu1g0017 216 PANTHER CYTOCHROME P450 71B11-RELATED 117 159 - -
Ssu1g0017 216 Gene3D Cytochrome P450 31 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g0017 216 PANTHER CYTOCHROME P450 71D10 13 103 - -
Ssu1g0017 216 PANTHER CYTOCHROME P450 71D10 117 159 - -
Ssu1g0017 216 PANTHER CYTOCHROME P450 71D10 151 214 - -
Ssu1g0017 216 Pfam Cytochrome P450 40 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu1g0017 216 SUPERFAMILY Cytochrome P450 36 211 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0017 Ssu-Chr1 1484380 1485270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0017 21 116 Cytochrome P450 AT3G26280 41.964 4.79e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g0017 - - gmx:606548 230.72