Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03142 ATGGAGAAGGGAGGAGAGAAATGCAGTGAGGAGTTGTACGAGGTTCTGGGGATAGAGAAGGAGTGTACCCCATCTGAACTCAAGAAAGCTTATAAGAAACTCGCACTGAAATGGCACCCAGATCGTTGTTCAGGGAGCCGCGTGGAAGAAGGCAAGAAGAAATTCCAGGCAATCCAATACGCCTATTCTGAATCAAAATTTGGTGGTGGTTTCGTTCTGAGGATTGTTCTTATTCGTGATGAGCTAATGGTATGTTTGTTTGAGCAGGGTATGGGTGACTTCTTGAATGAAATGGCCACAATGATGAGCCAATCAAAACCTAGTGTTTCCGAATTTTGTGAGATTTCCGTATCGTACGCATACAACGTCAAGTACAAGGCTGCCCTTGATGAAAACAGGGAGGAGAGTTTTGAGGAGTTGCAACAGCTCTTCGAAGAAATGTTTCAAGCCAATATTGGGTCAGTCGGCAGCTCCTCTCACACTGCACCTGCTTCATCTGTGGAGCATCTTCAAGATATGAAGAAGGGAAGGGGAATAGAAGAAGGAATTGCAGGAGGAAGAGGTAGCACCCTCCAAGAGAATTCGATGGTTACGTGCCCTGCATGCAAAGCTTTAGATGTTCTCTGTCAAGCCATTGCGGAAGCCCTATCCTCCTGTGCTGCATTCAAGGCAAGGCATTCTGTTTTGGAAGCCAAGCCAAGACCTTTCTCATCTCTCTACGCAACAGAAAGAATAATATCTTACATATTACAGCACCTCCCTCTTCCACTTTTCTCCCGTTCACTTCTCTTGGATCGATATTTGAGGCATGGATTTTTACTAACACTTGATAAGTACAATGCATGA 846 0.4492 MEKGGEKCSEELYEVLGIEKECTPSELKKAYKKLALKWHPDRCSGSRVEEGKKKFQAIQYAYSESKFGGGFVLRIVLIRDELMVCLFEQGMGDFLNEMATMMSQSKPSVSEFCEISVSYAYNVKYKAALDENREESFEELQQLFEEMFQANIGSVGSSSHTAPASSVEHLQDMKKGRGIEEGIAGGRGSTLQENSMVTCPACKALDVLCQAIAEALSSCAAFKARHSVLEAKPRPFSSLYATERIISYILQHLPLPLFSRSLLLDRYLRHGFLLTLDKYNA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03142 281 CDD DnaJ 11 63 IPR001623 -
Spst9g03142 281 Pfam DnaJ domain 12 63 IPR001623 -
Spst9g03142 281 Gene3D DnaJ domain 8 66 IPR036869 -
Spst9g03142 281 Coils Coil 126 146 - -
Spst9g03142 281 SMART dnaj_3 10 82 IPR001623 -
Spst9g03142 281 PRINTS DnaJ domain signature 13 31 IPR001623 -
Spst9g03142 281 PRINTS DnaJ domain signature 31 46 IPR001623 -
Spst9g03142 281 ProSiteProfiles dnaJ domain profile. 11 70 IPR001623 -
Spst9g03142 281 PANTHER PUTATIVE, EXPRESSED-RELATED 4 170 - -
Spst9g03142 281 SUPERFAMILY Chaperone J-domain 10 63 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03142 Spst-Chr9 65015133 65019443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03142 13 62 C2H2 Transcription Factor Family AT1G74250 43.396 7.29e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03142 - - aprc:113861452 134.806