Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03136 ATGGCTGTTAACTCTATTTCTTCCATTCAAATCCCAGTTCAGAAATATGGATCATTTGTGAAGTACCCAGACAAAAAATTTATGTGGAAACGAAGCTATGTCCCTCTCAAAAGGGCATCGGTACTCAGGATCACAGCATCCATCAAGAACAAGGTGTATGAAGATCGTTCTGAGGGCATAGTGTGCTACCAAGATGAGCGAGGGGAAATCATTTGCGAAGGGTATGATGAAGGACCATGTTTTCAAAGAATTCCAGACCCCACCAATCATCCAAGAGAGACTCAAATCACGAATCTTCTTCTTCGACAAAGTTGGATTCAGATTGTGAAAGGAGAGAACTCCAATGATGGTGGTGGTGTTGAAGGACGTCTGAAAAAGGACTTAAACTGCGTGAAACGGTGTCGGAATCGAATTTGTTGTGTTGTAGTGGGAAAGGGTAGATCAAGGATGTGGTGGAGATCAGCATCATTCATCATGGACAGGCAGCAGAACGAAGCTGCGTTCAAGGGGGACACCATCGCTCCTATCGACTCATCAATATCAAACCCTAACCCCAATCCCAACCCCAACCCTAAGACCTCTGCCTACTATGAGACTAGAGCAGCGCACCACGGCGTCGTCACCAGCGACTGGCTGGCTCAGGCTCAGGCGGCCATTGGGCCGGACCCTGACCCTCTACCACAACCCAGGCTCGATCCTGACAAGCCCTTCAGCGTCATCAACGAGTTTAATAACTGGAGGAAACAGCCCCATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATAAGGTCCAGCCAGGCTACCACCATGATGCAGCTGGAAATCGAGCTGAAGAAGGCGTCCGATACTCTCAAGTCGTGGGATACGACCTCTATCTCTTTGACAGCGGGCTGTGATCTCTTTATGCGATATGTCACTCGAACTTCTGCTTTAGAATATGAAGACTTCAATTCCGCTAAATCTCGCTTGATTGAGCGTGCTGAGAAGTTTGGCGAAATCTCCTACAAGGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTCCTCAAATTGGCAGCACAAAACAAGAAATTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGATCGAACAGGATTGCGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAGCTACTAATAGACTCTGCTGTGGCATATACTATGGATGAGGTGGACATGGTTTTTGTAGGTGCAGATGGAGTTGTCGAGAGCGGGGGCATAATCAACATGATGGGGACCTACCAAATTGCATTGGTTGCTCACGGTATGAATAAACCAGTTTATGTCGCTGCTGAAAGCTACAAGTTTGCGCGCCTTTACCCTCTTGACCAAAAGGATTTAGCCCCTGCTTTACGCCCTATTGATTTTGGTGTACCTATTCCGTCCAAGGTCGAGGTTGAACAATCCGCGCGGGACTACACCCCTCCTCAGTACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTGATCCAGCTATACTTATAA 1611 0.4749 MAVNSISSIQIPVQKYGSFVKYPDKKFMWKRSYVPLKRASVLRITASIKNKVYEDRSEGIVCYQDERGEIICEGYDEGPCFQRIPDPTNHPRETQITNLLLRQSWIQIVKGENSNDGGGVEGRLKKDLNCVKRCRNRICCVVVGKGRSRMWWRSASFIMDRQQNEAAFKGDTIAPIDSSISNPNPNPNPNPKTSAYYETRAAHHGVVTSDWLAQAQAAIGPDPDPLPQPRLDPDKPFSVINEFNNWRKQPHLAEAVAAIRALAAVIRSSQATTMMQLEIELKKASDTLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHGMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVEQSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03136 536 Coils Coil 274 294 - -
Spst9g03136 536 FunFam Translation initiation factor eIF-2B subunit alpha 340 536 - -
Spst9g03136 536 Gene3D - 339 536 IPR042529 -
Spst9g03136 536 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 203 536 - -
Spst9g03136 536 Pfam Initiation factor 2 subunit family 251 524 IPR000649 GO:0044237
Spst9g03136 536 SUPERFAMILY NagB/RpiA/CoA transferase-like 251 535 IPR037171 -
Spst9g03136 536 FunFam Translation initiation factor eIF-2B subunit alpha 235 337 - -
Spst9g03136 536 Gene3D - 236 337 IPR042528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03136 Spst-Chr9 64990258 64999282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03136 150 536 Eukaryotic Initiation Factors Gene Family AT1G53880 80.051 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03136 K03239 - gmx:100799015 661.373