Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03134 ATGACCACCAAACTCAAACAAGTCTTTCCCACTATTTCCCGTTCCCTCACCAAAACCAAACTCTTGTTGGCTCTCGCTGCCACTCTCCTTGTCACCCTCGCCGTCGTGGCCGGAGTCACCTCTCGCAAGAACTCCGGCGACAACGCCTCCTCCTCCACTTCGTCGCACGCCATCATCAAAAGCGCCTGCAGGAGCACCTTGTACCCGGAATTATGCTTCTCAAACATAGCCACTGAGCCAGGCCTCGCGGACAAAGTTTCGAGCCACAAGGACGTGATAGAGCACTCGTTGAACATAACCGCGAGAATTGTTGGGCGGAATTACTTCATCGTGCAGAAGCTCTCACACGCAAAGGGCCTGACCAAGAGGCAGAAAACGGCCCTCCATGATTGCTTGGAAACCATTGGTGAGACCCTCGACGAGCTTCACAAGGCCATAGATGAACTCAAAGACTACCCCTCCAAGAAGTCTTTGTCACAGTACGCCGAGGATCTGAAAACTCTCATCAGTGCCGCCATAACCAACCAAGATACGTGCCTCGACGGTTTCTCTCACGACCAGGCTGACAAAATACTGAGGCATAAGCATCTGGAGGCAGGCCAAGTGCACGCGGAGCACTTGTGCAGCAACGCATTGGCCATGACAAAGAACCTTACTGACACCGACATGGCCAACAGCAACATAAACAAACCCAGGAAAACCATGGAGGCTCACGACGATATCATGTGGCCCGACTGGATTTCCGCCGCCGACCGCCGCCTTCTGCAGACAGGTACGGTAAATCCTGACGTGGTGGTGGCGGCGGACGGGAGCGGCAACTTCAGGACGGTGTCGGCTGCGGTGGCTGCGGCTCCTGAGAAGAGTAGCAAGAGATATGTGATTAAGATCAAAGCGGGTGTGTACAGAGAGAACGTGGATGTGCCGAAGAAGAAGACTAACATCATGTTCCTTGGAGATGGCAGAACCAACACCATCATCACTGCAAGTAGAAATGTGGTGGATGGCAGCACCACCTTCAACTCTGCCACAGTAGCTGTGGTGGGTGAAAGATTCTTGGGAAGAGACATAACCATCCAGAACTCAGCTGGTCCCTCAAAGCACCAAGCAGTTGCCCTGAGAGTTGGTGCAGACCTCTCGGCATTCTACCGCTGCGACTTCATTGCATACCAAGACACCCTTTACGTCCACAGCAACCGCCAATTCTTTGTCAACTGCTACATAGCCGGCACCGTCGACTTCATCTTCGGCAACTCCGCTGCTGTCATCCAGAACTCCGACATCCACGCCAGGCGTCCCAATCCGGGCCAAAAGAACATGGTCACCGCTCAGGGCCGCCTTGACCCCAACCAGAACACCGGCATTGTCATTCAGAAAAGCAGGATTGGTGCCACCAAGGACTTGGAGTCTGTCAAAGGCAGCTTCCCCACTTTTCTCGGCAGGCCATGGAAGGAGTACTCTCGTACTGTCATCATGCAATCAACCATCAGTGACATCATTGACCCTGCTGGCTGGCATGAGTGGGATGGCAACTTTGCCTTGAATACGTTGTTCTACGGGGAGTATCAGAACACTGGGCCTGGTGCTGCAACCTCGAGGAGGGTTTCTTGGAAAGGGTTCAAGGTCATCACCAGCGCTACTGAGGCCAACAGTTTTACTCCTGCCAATTTCATTGCAGGCTCAAGCTGGTTGCCCTCTACTGGATTTCCATTCTCCCTTGGCCTCTAA 1725 0.5345 MTTKLKQVFPTISRSLTKTKLLLALAATLLVTLAVVAGVTSRKNSGDNASSSTSSHAIIKSACRSTLYPELCFSNIATEPGLADKVSSHKDVIEHSLNITARIVGRNYFIVQKLSHAKGLTKRQKTALHDCLETIGETLDELHKAIDELKDYPSKKSLSQYAEDLKTLISAAITNQDTCLDGFSHDQADKILRHKHLEAGQVHAEHLCSNALAMTKNLTDTDMANSNINKPRKTMEAHDDIMWPDWISAADRRLLQTGTVNPDVVVAADGSGNFRTVSAAVAAAPEKSSKRYVIKIKAGVYRENVDVPKKKTNIMFLGDGRTNTIITASRNVVDGSTTFNSATVAVVGERFLGRDITIQNSAGPSKHQAVALRVGADLSAFYRCDFIAYQDTLYVHSNRQFFVNCYIAGTVDFIFGNSAAVIQNSDIHARRPNPGQKNMVTAQGRLDPNQNTGIVIQKSRIGATKDLESVKGSFPTFLGRPWKEYSRTVIMQSTISDIIDPAGWHEWDGNFALNTLFYGEYQNTGPGAATSRRVSWKGFKVITSATEANSFTPANFIAGSSWLPSTGFPFSLGL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03134 574 Gene3D - 257 574 IPR012334 -
Spst9g03134 574 Pfam Plant invertase/pectin methylesterase inhibitor 58 214 IPR006501 GO:0004857
Spst9g03134 574 NCBIfam pectinesterase inhibitor domain 43 219 IPR006501 GO:0004857
Spst9g03134 574 FunFam Pectinesterase 257 574 - -
Spst9g03134 574 PANTHER PECTINESTERASE 32 564 - -
Spst9g03134 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 219 IPR035513 -
Spst9g03134 574 SUPERFAMILY Pectin lyase-like 259 573 IPR011050 -
Spst9g03134 574 SMART PMEI_2 54 214 IPR006501 GO:0004857
Spst9g03134 574 FunFam Pectinesterase 55 219 - -
Spst9g03134 574 CDD PMEI-like_3 61 219 - -
Spst9g03134 574 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Spst9g03134 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 220 IPR035513 -
Spst9g03134 574 Pfam Pectinesterase 263 559 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03134 Spst-Chr9 64982005 64984623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03134 1 574 Carbohydrate Esterase AT3G14310 64.370 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03134 K01051 - jre:109013060 803.512