Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03126 ATGGTGGAGTTTCGAAGGTTGTTGTTGCTCTTGCTGTATATCATTGCCTGCATTCTTTGTTGGATGCCCAATGGTGCCACTGCCTCCACAGATCCAAATGATGCTGCTGCTGTGAGATTTTTGTTTCAAAATATGAACTCACCGTCCCAGCTTGGTTGGCCTGCTAATGGTGATGATCCATGTGGTCAATCTTGGAAAGGGATTACTTGCTCAGGCAACCGTGTTACGGAGATTAAGTTATCTAATCTTGGACTAACTGGGTCGCTGCCATATGGATTACAAGTCCTGACATCTCTGACCAACCTAGACATGAGTAGCAACAGTCTTGGCGGCAGCATACCTTACGAACTCCCTCCATATTTGCAGCGATTAAATCTTGCTCATAATAACATCACAGGGACGGTCCCTTACTCTATTTCAAACTTGACAGCTCTTACTGACCTGAATCTTGGTCACAATCAGCTCCTGCAAGGACTGGCTGTTAACTTTCTTAATCTTTCTACCCTCTCCACATTGGATCTCTCTTTCAATTCTCTGACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACGCATAACAACCATGTATCTGCAAAACAATCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTTCCTCTGGATTATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCAGAACAGTTGAAGAATATAAACCTACAGAGCGGTGGTAATGCATGGAGCTCTGGGCCTGCACCCCCACCTCCTCCTGGGACGCCTCCAGTACCTAAAAGCAGCAAGCACCACAAATCTGGAGGGGGAAGCACCACCCCATCAGATGTTGGCAGTAGCAGCATCTCAGTTGGTGAAGGCAAAAGATCCAGTGTAGGAGCTGGCGCCATAGCTGGAATTGTAATCTCTGTCATAGTTGTAGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGACATCTTCAGATTTAGAAAAGCTTGACAATCAGTCCTTTGCTCCACTTCCTTCAAATGAAGTGCATGAAGAGAAGTTGGAGCAAATGTCCTCTGTATCTGACATGAAGACATTTGATACTTCCGCATCAATAAATCTTAAACCCCCACCTATTGATCGACATAAATCATTTGATGATGAAGAATTCTCCAAGAAGTCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATATTCTATTGCTGAACTGCAGATTGCTACTGGTAGCTTCAGTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGACAGGTTCTTGCAGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCAGATGATTTTATAGAAATTATTTCAAACATCTCCATTTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTACGAATTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGACGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTATCTGCATGAAGTTAGTTCGCCATCAATTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCAGAGCTCAATCCTCATCTTTCAGATAGTGGATTGGCAAGTTATATTCCAAACGCAGACCAGATATTGAGCCATAATGTTGGATCCGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTTTGCAAAGTGATGTCTACAGCTTTGGGGTTGTTATGTTGGAACTTCTCAGCGGACGGAAGCCATTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTGCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCATTGAAAGGGCTATATCCTGTCAAGTCTCTTTCTCGATTTGCCGATGTTATTGCTCTTTGCGTGCAGACGGAGCCTGAATTTCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCATGGAGGATCCCAACGAGGAAGTGATGAGCAAGCTCTACGGGAGATCTAA 2175 0.4349 MVEFRRLLLLLLYIIACILCWMPNGATASTDPNDAAAVRFLFQNMNSPSQLGWPANGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLTNLDMSSNSLGGSIPYELPPYLQRLNLAHNNITGTVPYSISNLTALTDLNLGHNQLLQGLAVNFLNLSTLSTLDLSFNSLTGDLPQTMSSLSRITTMYLQNNQFTGTIDVLANLPLDYLNVENNNFTGWIPEQLKNINLQSGGNAWSSGPAPPPPPGTPPVPKSSKHHKSGGGSTTPSDVGSSSISVGEGKRSSVGAGAIAGIVISVIVVGAIVAFFLVKRKSKKTSSDLEKLDNQSFAPLPSNEVHEEKLEQMSSVSDMKTFDTSASINLKPPPIDRHKSFDDEEFSKKSTIVKKTVTAPANVKSYSIAELQIATGSFSVDHLVGEGSFGRVYRAQFDDGQVLAVKKIDSSVLPNDLSDDFIEIISNISILHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSIVHKNIKSANILLDAELNPHLSDSGLASYIPNADQILSHNVGSGYDAPEVALSGQYTLQSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEQALREI 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03126 724 MobiDBLite consensus disorder prediction 702 724 - -
Spst9g03126 724 ProSitePatterns Protein kinases ATP-binding region signature. 424 447 IPR017441 GO:0005524
Spst9g03126 724 Gene3D Ribonuclease Inhibitor 162 248 IPR032675 -
Spst9g03126 724 Gene3D Ribonuclease Inhibitor 39 161 IPR032675 -
Spst9g03126 724 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 382 495 - -
Spst9g03126 724 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 496 704 - -
Spst9g03126 724 SUPERFAMILY L domain-like 30 235 - -
Spst9g03126 724 Gene3D Phosphorylase Kinase; domain 1 379 495 - -
Spst9g03126 724 MobiDBLite consensus disorder prediction 267 289 - -
Spst9g03126 724 ProSiteProfiles Protein kinase domain profile. 418 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03126 724 SUPERFAMILY Protein kinase-like (PK-like) 400 690 IPR011009 -
Spst9g03126 724 Gene3D Transferase(Phosphotransferase) domain 1 497 712 - -
Spst9g03126 724 Pfam Leucine rich repeat 120 155 IPR001611 GO:0005515
Spst9g03126 724 MobiDBLite consensus disorder prediction 240 291 - -
Spst9g03126 724 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 256 - -
Spst9g03126 724 PANTHER LEUCINE RICH REPEAT KINASE 2 73 698 - -
Spst9g03126 724 Pfam Leucine rich repeat N-terminal domain 43 71 IPR013210 -
Spst9g03126 724 Pfam Protein tyrosine and serine/threonine kinase 421 690 IPR001245 GO:0004672|GO:0006468
Spst9g03126 724 MobiDBLite consensus disorder prediction 247 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03126 Spst-Chr9 64947371 64954997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03126 17 703 Strubbelig Receptor Gene Family AT1G53730 67.003 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Spst9g03126 PK_Tyr_Ser-Thr 8.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03126 - - gmx:100807707 1218.76