Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03125 ATGGCTGAGGAACTGGATAAACCGTTGCTTGATCCCGATAATTTCAACCGAGATGGCATTGATTTGGAACGTATACCGTTAGAAGAAGTATTTGAACAGTTGAGAACATCAAGAGGAGGACTTTCATCTGACGATGCTGAAGCTCGAATAGAGATATTTGGCCCAAACAAACTTGAAGAGAAGAAAGTTGCATTGTGGTTATTTATTTTGACGGGCAAAGAGGCATTCAATTTTGTTGCGAAGCCCTTGCTTGCAGAGAATAAAATATTGAAATTTCTTAGTTTTATGTGGAATCCTTTATCATGGGTTATGGAAGCAGCAGCATTGATGGCGATTATCCTTGCTAATGGTGGAGGGGAAGGTCCTGATTGGCAAGACTTTATAGGGATTATATGCCTACTGGTAATAAACTCCACTATTAGTTTTATAGAAGAAAATAATGCAGGTAATGCTGCAGCAGCATTAATGGCTCGTTTAGCTCCTAAAACAAGGGTCCTCAGAGATGGGCAGTGGCAAGAGCAAGATGCAGCTGTTTTAGTACCTGGAGATATAATTAGCATAAAATTGGGAGACATAATTCCAGCTGATGCTCGCTTGCTAGAAGGGGACCCTCTAAAAATTGATCAGGCAACCCTTACTGGAGAATCTCTACCTGTCACAAAAAGAACTGGTGACGAGGTCTTTTCCGGTTCAACATGTAAACATGGAGAGATTGAAGCTGTAGTGATAGCAACAGGAGTTCACTCCTTTTTTGGCAAGGCAGCATACCTGGTTGACAGTACGGAAGTTGTTGGACATTTTCAGAAGGTCCTTACCTCTATTGGTAACTTCTGCATTTGCTCTATAGCAATAGGGATGATTTTTGAAATAATTATAATGTTCCCAGTGGAGCATCGATCATACAGGGATGGAATCAACAATCTTCTTGTTCTCCTAATTGGAGGAATACCCATCGCCATGCCAACAGTATTATCCGTTACACTTGCAATCGGTTCTCACCGACTTTCTCAGCAGGGAGCTATCACAAAAAGAATGACTGCAATTGAAGAAATGGCAGGCATGGATGTGTTATGCAGTGACAAAACTGGAACTCTTACACTTAATCGCCTGACTGTTGATCAAAACCTAATTGAGGTTTTTAATAGAAATATGGACAAAGATACGGTTGTTCTACTAGCAGCCAGAGCAGCTAGACTGGAAAACCAGGATGCCATTGATACCGCAGTAGTTAATATGCTAGCTGATCCAAAGGAGGCACGTGCAAACATCACTGAAGTTCATTTTTTACCATTCAATCCTGTAGATAAACGTACAGCTATTACGTATATTGATTCTGATGGCAATTTTTATAGGGCCAGTAAAGGAGCTCCGGAACAGGTATCAAAATTCATTGAAGATGGTGTTATATAA 1410 0.4064 MAEELDKPLLDPDNFNRDGIDLERIPLEEVFEQLRTSRGGLSSDDAEARIEIFGPNKLEEKKVALWLFILTGKEAFNFVAKPLLAENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFIGIICLLVINSTISFIEENNAGNAAAALMARLAPKTRVLRDGQWQEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQATLTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAYLVDSTEVVGHFQKVLTSIGNFCICSIAIGMIFEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDQNLIEVFNRNMDKDTVVLLAARAARLENQDAIDTAVVNMLADPKEARANITEVHFLPFNPVDKRTAITYIDSDGNFYRASKGAPEQVSKFIEDGVI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03125 469 SMART Cation_ATPase_N_a_2 21 116 IPR004014 -
Spst9g03125 469 Pfam E1-E2 ATPase 159 337 - -
Spst9g03125 469 SUPERFAMILY Calcium ATPase, transduction domain A 161 257 IPR008250 -
Spst9g03125 469 FunFam Plasma membrane ATPase 161 245 - -
Spst9g03125 469 ProSitePatterns E1-E2 ATPases phosphorylation site. 360 366 IPR018303 -
Spst9g03125 469 PANTHER CALCIUM-TRANSPORTING ATPASE 25 462 - -
Spst9g03125 469 NCBIfam HAD-IC family P-type ATPase 130 379 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g03125 469 Pfam Cation transporter/ATPase, N-terminus 25 70 IPR004014 -
Spst9g03125 469 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 364 462 IPR023299 GO:0000166
Spst9g03125 469 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 353 IPR023298 -
Spst9g03125 469 Gene3D - 370 467 IPR023299 GO:0000166
Spst9g03125 469 PRINTS P-type cation-transporting ATPase superfamily signature 358 372 - -
Spst9g03125 469 PRINTS P-type cation-transporting ATPase superfamily signature 208 222 - -
Spst9g03125 469 Gene3D - 95 175 - -
Spst9g03125 469 Gene3D - 225 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03125 Spst-Chr9 64931716 64935315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03125 1 460 Primary Pumps ATPases AT1G17260 79.130 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03125 K01535 - gmx:100795836 791.186