Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03120 ATGGCTTCCGCTTGTGCTTCCTCTGCCATTGCTGCTGTTTCCATCTCCAATCCAAGTTCCCAGAAGAATGGATCATCCTTGGGAACCCCCAAAGCTTCTTTTCTTGGTGGAAGGAAATTGAGGGTGAACAAATACACAGCAGCAGTTGGAGGACGATCCACCACTACAGTGTGCGCAGTAGCGGACCCTGACAGGCCTCTCTGGTTTCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCTGGAGACTTTGGCTTTGACCCTCTTGGTCTGGGATCTGATCCGGAGAGTCTGAGGTGGAATGTTCAGGCAGAACTAGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGGATTTTCATTCCAGAATTCCTGACAAAGATTGGTATCTTGAACACTCCTTCATGGTACTCAGCTGGAGAACTGGAATATTTCACAGACACCACTACCCTCTTCATAGTTGAGCTCTTTTTCATTGGCTGGGCTGAGGGTAGAAGGTGGGCTGACATAATAAAGCCAGGGTGTGTCAACACGGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGTTACCCAGGTGGGCTTTGGTTTGACCCCCTTGGATGGGGAAGTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACCAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACCGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA 813 0.5092 MASACASSAIAAVSISNPSSQKNGSSLGTPKASFLGGRKLRVNKYTAAVGGRSTTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03120 270 FunFam Chlorophyll a-b binding protein, chloroplastic 75 260 - -
Spst9g03120 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Spst9g03120 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Spst9g03120 270 SUPERFAMILY Chlorophyll a-b binding protein 60 268 - -
Spst9g03120 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 25 268 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03120 Spst-Chr9 64909817 64911121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03120 52 270 Chloroplast and Mitochondria Gene Families AT3G61470 90.000 2.17e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03120 K08908 - gmx:100784089 528.094