Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03113 ATGGCCAACCTTCCAAACTCAAAGCTTAACAGCGAAGAGAAGATGAAGGAAACAGAGGAATTAGAAAATGAAGAAAACTTCTCGCGTGCAGTGCAGCTTGGGACCTCTGTGGTGCTTTCCATGGCACTGCAATCGGCGACGGAGCTAGGCCAACATCGTCTCCTCGCCCTTCTTTCCTCTCACTCCATTCTTAAATCTTCCCTCATTCCCGACCACCATAACCCTGCCACCTTCCACAGACTCTACACCATCACTCCTGTCGCCACATTCTTTGCTCGCAACTCTGATGGGGTTTCATTGGGACCCTTGATGGCCTTGTTCCTAGACAAAATCTTCCTGCACAGCTGGTCTGAGCTGAAAGATGCAATTCGGGAGGGGGGTATTCCATTCAACAGGGTTTATGGCACTCATGCTTTTGAGTATCCAAGTTTGGACTCAAGGTTCAATCAAGTTTTCAACACAGCAATGATCAATCACACCACTTTAGTGATGACGAAGGTTCTGGAATGCTACAAAGGTTTTGATGACATAAAAATGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAATATTAACTTGATCACTTCCAAATACCCTCATATCCAGGGCATCAATTTTGACTTGCCTCATGTCATACAACATGCTCCTTCATATCCGGGAGTGGAACACGTTGGCGGAGATATGTTTAAGAATGTGCCCAAAGGAGACGCCATCTTTATGAAGTGGATACTTCATGATTGGAGCGATGAATACTGTTTGAAGCTGTTGAAGAATTGCTATGATGCAATTCCTGATGATGGAAAGGTGATAGTTGTGGAAGCAGTTCTTCCAGTAAAACCAGAGACTAGTGCTGCTTATAGGGCAGTTTCACAACTTGATGTTATGATGATGACTCAAAACCCCGGAGGGAAAGAGCGATGTGAACAAAAGTTCATGGATTTGGCAACTGCAGCTGGATTTCGTGGCATCAGATATGAATGTCATGTCCACACTTTCTGGGTTATGGAGTTCTTCAAGTAG 1020 0.451 MANLPNSKLNSEEKMKETEELENEENFSRAVQLGTSVVLSMALQSATELGQHRLLALLSSHSILKSSLIPDHHNPATFHRLYTITPVATFFARNSDGVSLGPLMALFLDKIFLHSWSELKDAIREGGIPFNRVYGTHAFEYPSLDSRFNQVFNTAMINHTTLVMTKVLECYKGFDDIKMLVDVGGGLGININLITSKYPHIQGINFDLPHVIQHAPSYPGVEHVGGDMFKNVPKGDAIFMKWILHDWSDEYCLKLLKNCYDAIPDDGKVIVVEAVLPVKPETSAAYRAVSQLDVMMMTQNPGGKERCEQKFMDLATAAGFRGIRYECHVHTFWVMEFFK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03113 339 Gene3D Vaccinia Virus protein VP39 149 328 IPR029063 -
Spst9g03113 339 MobiDBLite consensus disorder prediction 1 26 - -
Spst9g03113 339 FunFam Caffeic acid O-methyltransferase 92 339 - -
Spst9g03113 339 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 339 IPR016461 GO:0008168
Spst9g03113 339 PIRSF O-mtase 50 339 IPR016461 GO:0008168
Spst9g03113 339 PIRSF O-mtase 7 52 IPR016461 GO:0008168
Spst9g03113 339 MobiDBLite consensus disorder prediction 10 26 - -
Spst9g03113 339 SUPERFAMILY "Winged helix" DNA-binding domain 22 94 IPR036390 -
Spst9g03113 339 PANTHER O-METHYLTRANSFERASE 44 324 IPR016461 GO:0008168
Spst9g03113 339 Pfam O-methyltransferase domain 116 321 IPR001077 GO:0008171
Spst9g03113 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 337 IPR029063 -
Spst9g03113 339 Gene3D - 52 167 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03113 Spst-Chr9 64845473 64848214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03113 20 339 Monolignol Biosynthesis Gene Families AT5G54160 47.009 1.85e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03113 K13066 - gmx:100803633 543.117