Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03112 ATGGAAAAATCGAAACTCCATTCCCACCCACAATTTGACTATAAAAAATTGAAGAAAACGATACATTCTTTCAGTTTTGTGATGGCTGAAACGTTAGAATCAACACAAGAAGTTATGAATGGGAGAGAAGAAGAAGATGAGGTGACGTTGTGCATGGAAAAGATGCTTTCGTTTGTGGTTCCAATGGCTTTGAGGACAACGGTTGAGCTTGGCGTGTTCGATATTCTAGCCAAAGCTGGGGAAGGTGGGAAACTGTGTGCAGAAGAGATTGCAGTTGAGATAGGAAGCAAGAACCCCGAAGCTCCAGCAATGGTGGATCGTCTTCTTAGTCTTCTGAACCACACCCTCGGAGGTTCTACACCCTCTCTCCTGCTTCCAAATTTTGTTTCTGATCCTCACGGTGTATCATTGGGATCTTCCGTCAAGTTGCTTCTCGACCCCATCTTCTACAAAAGCTGGAGCGAACTGAAAGAAGCGATCGTAGAAGGGGGTGTAGCATTCGACAGGGCCCATGGCATGCATGCCTTCGAATATTCAGGTGTGGATCCCAGGTTTAATCAGGTTTTCAACAACAGTATGACAGCCCTCACCACTCTAATTATGAAGAGGATTCTTGAATTCTACAATGGTTTTCTGCATGTCACAAAGCTCGTCGACGTTGGTGGAGGTTATGGTGTCAACCTCAAATTGATCACATCCAAATACCCTCATATTGAAGCTATTAATTTTGACTTGCCTCATGTCGTGGAAAATGCCCCCGTCTATTCAGGTTATTATCTGGAATTCTGTATTCATGAAGACATGTTTGAGAGCATGCGTGGTGTGTGTTTGAGTCACAGTTATTGTAATCCTGCAGGTGTGGAGCATGTGGGAGGAGACATGTTTGAGGGCGTTCCTTCAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCGTGAAGGTCTTGAAGAACTGCTACAAAGCTATTCCTGATGACGGAAAGGTTATTGTGGTGGACTCAATTGTGTCGATGGTGCCTGAGAAAAGTGTTACTGCTAAGAGTGTTTTGGGATCTGACCTTATGATGATGATTCACAACCCAGGAGGGAAAGAGCGAACGCGCCAAGAATTCATAGAATTGGCAGAAGCATCTGGATTTAGCGGGGTCAGATTCATCTGCTGTGTATGCTGCAACTGGGCTATGGAGTTCCACAAGTAA 1218 0.445 MEKSKLHSHPQFDYKKLKKTIHSFSFVMAETLESTQEVMNGREEEDEVTLCMEKMLSFVVPMALRTTVELGVFDILAKAGEGGKLCAEEIAVEIGSKNPEAPAMVDRLLSLLNHTLGGSTPSLLLPNFVSDPHGVSLGSSVKLLLDPIFYKSWSELKEAIVEGGVAFDRAHGMHAFEYSGVDPRFNQVFNNSMTALTTLIMKRILEFYNGFLHVTKLVDVGGGYGVNLKLITSKYPHIEAINFDLPHVVENAPVYSGYYLEFCIHEDMFESMRGVCLSHSYCNPAGVEHVGGDMFEGVPSGDAIFMKWILHDWSDEHCVKVLKNCYKAIPDDGKVIVVDSIVSMVPEKSVTAKSVLGSDLMMMIHNPGGKERTRQEFIELAEASGFSGVRFICCVCCNWAMEFHK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03112 405 PANTHER O-METHYLTRANSFERASE 58 386 IPR016461 GO:0008168
Spst9g03112 405 Gene3D - 29 116 IPR036388 -
Spst9g03112 405 Gene3D Vaccinia Virus protein VP39 130 405 IPR029063 -
Spst9g03112 405 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 402 IPR029063 -
Spst9g03112 405 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 52 405 IPR016461 GO:0008168
Spst9g03112 405 Pfam Dimerisation domain 62 112 IPR012967 GO:0046983
Spst9g03112 405 PIRSF O-mtase 124 272 IPR016461 GO:0008168
Spst9g03112 405 PIRSF O-mtase 28 116 IPR016461 GO:0008168
Spst9g03112 405 PIRSF O-mtase 277 405 IPR016461 GO:0008168
Spst9g03112 405 Pfam O-methyltransferase domain 153 256 IPR001077 GO:0008171
Spst9g03112 405 Pfam O-methyltransferase domain 285 387 IPR001077 GO:0008171
Spst9g03112 405 SUPERFAMILY "Winged helix" DNA-binding domain 43 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03112 Spst-Chr9 64839496 64844558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03112 45 393 Monolignol Biosynthesis Gene Families AT5G54160 46.301 3.39e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03112 K13066 - vun:114162418 408.683