Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03096 ATGAGCGTGAAGGAAGCGAAAGGTTGCATGGTGGTTGGGAAATACGAGTTGGGAAAAACCATCGGAGAGGGGAGCTTTGCGAAGGTGAAGTTCGCCAGGCACGTCCACAACGGCAACTACGTTGCCATCAAAATTCTCCACCGTAAACATGTCCTCCGCCACAACATGATGGAACAGGTGATGGCAAGCAAAACAAAGATTTATATTGTTCTGGAGTTTGTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGGAGACTTAAAGAAGAAGAAGCTAGAAATTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCTGAGAATCTTCTTCTGGACTCGAATAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACTCGCAGAAAGAGGATGAACTGCTCCGCACTGCATGTGGAACCCCAAATTATGTTGCTCCTGAGGTGCTTAATAATAAAGGCTATGTTGGTTCTACATCTGATGTCTGGTCTTGCGGAGTCATTCTCTTTGTACTTATGGCTGGGTACTTACCTTTTGATGAGCCAACTCACATGGCTCTGTACAAGAAAATTCTCAGGGCAGAATTCTCCTGTCCATCATGGTTTCCTCCACAAGCGAAGGCACTGCTGAAACGCATTCTTGACCCAAACCCTCTAACGGTAGCTTTGAATAGGATAAAAATTCCTGAGCTCTTAGGAGATGAGTGGTTCAAGAAAGGTTACAAACCAACATCCTTTACTAAGGAAGACCTAAGTGTGGATGATGTAGCCGTTGCTTTCAATGAGTCTAATGTAAGTATAGTGACGGAGAGAAAAGAGAAACCGGTCTACATGAATGCTTTTGAGCTCATTTCTAGGTCACAAAGTTTCAATCTTGGCAGTTTGTTCGAGAAGCAAACGGATCAAGTAAAGCAAGAAACCTGTTTTACCTCACATTGCCCTGCAAATGAAATTATGTATAAAATCGAGGAAGCAGCCAAGCCACTGGGGTTTAATGTACACAAGCAAAATTATAAGATGAAGCTGCAAGGTGATCGGAGCGGGAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTACTGAAAAATTTTCTTCTGATGACAATTGAATCTGTCAGAAGAACACATGATGCAATAGATTTTAGTTGGCTTCTTTCGAAGAGGCTCCGACTGGAATTGATTGCTACAACTGGCTGTCTTTGGCGTCAGGTTTTTGAAGTGGCTCCCTCAGTGCACATGGTGGAGCTGCGAAAGACAGGGGGTGATACACTTGAGTTTCATAAGGCATGTCAAAGTTCCTACTCTTTGCTCCTAATCCAGAAAGACAATAGCTACCTTTTTGAAATCTTCCCTCTTTGGTTTGTTTGCAGTTCTACGAAATTTTCTCATCAGGGTTGCAAGACATTGTGTGGCATACTGAAGGGAAAAAATGAAGAATTAAGGGATGAAGTAAGGTTTGGTCAGAAAAACAAGAGAGAGAGTTTGGTTTGGCGAAAGTTGTTGAACGATATATCTAACCCTTTTCGAAACTACCTCCACACAAGATTAATTAACAAGATGAAGAAAGTAATGATGAGAGTGGAGAAAATGCCTAATAGCTAG 1641 0.4223 MSVKEAKGCMVVGKYELGKTIGEGSFAKVKFARHVHNGNYVAIKILHRKHVLRHNMMEQVMASKTKIYIVLEFVDGGELFDKIAAKGRLKEEEARNYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYSQKEDELLRTACGTPNYVAPEVLNNKGYVGSTSDVWSCGVILFVLMAGYLPFDEPTHMALYKKILRAEFSCPSWFPPQAKALLKRILDPNPLTVALNRIKIPELLGDEWFKKGYKPTSFTKEDLSVDDVAVAFNESNVSIVTERKEKPVYMNAFELISRSQSFNLGSLFEKQTDQVKQETCFTSHCPANEIMYKIEEAAKPLGFNVHKQNYKMKLQGDRSGRKGHLSVATEVLKNFLLMTIESVRRTHDAIDFSWLLSKRLRLELIATTGCLWRQVFEVAPSVHMVELRKTGGDTLEFHKACQSSYSLLLIQKDNSYLFEIFPLWFVCSSTKFSHQGCKTLCGILKGKNEELRDEVRFGQKNKRESLVWRKLLNDISNPFRNYLHTRLINKMKKVMMRVEKMPNS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03096 546 ProSiteProfiles Protein kinase domain profile. 15 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03096 546 Pfam Protein kinase domain 59 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03096 546 Pfam NAF domain 289 349 IPR004041 GO:0007165
Spst9g03096 546 CDD CIPK_C 293 451 - -
Spst9g03096 546 SMART serkin_6 15 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03096 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Spst9g03096 546 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Spst9g03096 546 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 446 - -
Spst9g03096 546 FunFam Non-specific serine/threonine protein kinase 74 258 - -
Spst9g03096 546 SUPERFAMILY Protein kinase-like (PK-like) 11 271 IPR011009 -
Spst9g03096 546 Gene3D Phosphorylase Kinase; domain 1 4 59 - -
Spst9g03096 546 ProSiteProfiles NAF domain profile. 287 311 IPR018451 GO:0007165
Spst9g03096 546 FunFam Non-specific serine/threonine protein kinase 287 411 - -
Spst9g03096 546 Gene3D Transferase(Phosphotransferase) domain 1 78 252 - -
Spst9g03096 546 Gene3D Kinase associated domain 1, KA1 286 452 - -
Spst9g03096 546 Gene3D Phosphorylase Kinase; domain 1 60 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03096 Spst-Chr9 64769521 64778519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03096 12 447 CBL-interacting serine-threonine protein kinases AT1G01140 61.605 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst9g03096 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03096 - - gmx:100777218 663.299