Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03032 ATGAAAGAAGCATCGATGAGGATTTCAACCCTTGTTGCTGTTGTGCTCCTCCTGTGTTTTTCTTGTGCACTCCTTTGCCATGGCAATGAGAGCACCATGAGAGTGCTTTTGGAAGTGAAATCATCGTTCACTGAAGACGCAGAAAATGTTTTAAGCGGTTGGTCAGAAAACAACACCGATTACTGTAGTTGGAAAGGGGTGTCATGTGGTGGTGACGACTCGGTGAAAGTGGTGGGACTCAACCTGTCCGAGTCATCACTCGGTGGGTCAATATCACCCTCTCTCGGTCGTTTGAAAAACCTGCTCCACCTTGATCTCTCTTCTAACCGTCTCAAGGGTCCCATTCCACCTGCCCTCCTCAACCTCAGTTTGTTGGAATCTCTCTCACTCCACACCAACCAACTCACTGGCCAAATCCCCACCGAGATCGACTCGCTAATGCGTCTCCGAGTTTTGCGAATCGGTGACAATCAACTCAGTGGCCCGATTCCCGAGACACTTGGGTATATGCCGTACCTTGAGTACCTTGGTTTAGCCTCATGCAGACTCACCGGTTCGATTCCGCCCCAACTCGGTCGACTCAGTGAGTTGCAATATTTGATTCTGCAGGAAAATGAGTTGAGTGGGCCAATTCCTTCCGATTTGGGGTATTGCTGGAGCCTTGCAGTCTTCACCGCCGCTGGCAACAGACTCAATGACTCGGTCCCGAGTGAACTGAGTCGACTAAGGAAACTTCAAACGCTGAACCTTGCCAACAACAGCTTAACCGGGTCGATTCCGAGTCAACTCGGTCAGCTGAGTCAGCTTAAATATCTGAATTTCATGGGGAACCAACTAGAGGGTCCTATTCCCCCGTCTTTGGCTCAATTGGGTAACCTTCAAAATCTTGACTTGTCAAATAATATGCTTACTGGGGAAATTCCAGAGGAGTTAGGGAGCATGGGTCAGTTACAATATTTGGTTCTCTCCAGGAACAAACTCTATGGGACCATTCCAAGAACCATATGTTCCAATGCAACTAGCTTGGAGGGATTGATGATGGCAGAGAGTGGACTTCATGGTGAGATACCAGCTGAGTTGGGTCAGTGTCAATCACTGAAACAACTTGATTTATCAGGCAATTATCTCAGTGGGTCAATACCCATTGAGCTTTATGGGTTAATGGGGCTAACTGATCTCTTGCTTCACAACAACAGTTTGGTTGGTTCAATCTCTCCCTTCATAGGAAACCTCACTAACATGCAGACTCTTGCATTGTTTCATAACAACTTGCAGGGTAGTCTGCCCAGAGAGATTGGGAGGCTTGGGAAATTGGAGATAATGTATCTTTATGATAATCAGTTGTCAGGGAAGATTCCTTTGGAGATTGGTAACTGTTCAAGTTTGCAAATGGTTGATTTGTTTGGAAACCATTTCAGTGGTGGAATTCCCTTCACTATAGGGAGGCTGAAAGAGTTGAACTTTTTGCACCTTAGGCAGAATGTGCTTGTGGGTGTCATTCCCCCCACACTTGGGAACTGTCATAAACTGACTGTGCTAGATTTGGCATCTAATCGGCTCTCAGGTGGCATTCCTGCAACATTTGGATTCCTCAAAGAGTTGAAGCTGTTTATGCTCTACAACAATTCTCTTGAAGGTAGTATTCCTCGCCAACTTGTAAATTTAGCAAACCTGACCAGAGTGAATCTTTCAAATAACAGTCTGAATGGTAGTTTGGCTGCATTATGTAGCTCTAGGTCCTTTCTTTCTTTTGATGTCACAGACAATGGATTTGATGGTGAAATACCCTTTCAGCTGGGAAACTCACCCTCCCTTGAGAGGCTGAGATTAGGTAACAACAAGTTTTCTGGTGAAATTCCAAGGACATTGGGAAAAATCACCATGTTGTCATTGTTAGACGTCTCAGGAAATTCACTCACAGGACCAATACCAGACGAGCTTACTTTGTGTCATAACCTGACTCACATTGATTTAAATAATAACCTTCTATCTGGACACATACCACCATGGTTTGGAAGTTTGCCTCAGTTGGGAGAGGTTAAGCTCTCGTTCAATCGATTTTCTGGGTCTATTCCACCAGGCCTACTCAAACAACCAAACTTGTTGGTTCTTTCCTTGAATAATAATTCTCTTAGTGGAAGTCTCCCAGATGATATTGGTGATCTTGTATCTCTTAATGTCCTCAGGCTTGACCATAATAACTTCTCTGGACCAATCCCTCATGCAATAGGTAAACTGAGAAATCTGTATGAGCTGCAGCTATCCAATAATGGCTTTAGTGGCGAAATACCAATTGAGATGGGAAGTCTCAAAAATCTCCAAAGCATTTTGGACTTAAGTTACAATAATCTCTCTGGTCATATCCCTTCTTCACTTAGCACGCTGTCAAAATTGGAGGTACTTGATCTTTCTCACAATGAACTCACTGGAGAAGTGCCTTCAGTAGTTGGTGAAATGACGAGCTTGCAGAAGCTTGACATCTCTTACAATAACTTTCGAGGTGCATTGGAAAAGCAATTCTGCCGCTGGCCACGTGAGTCGTTTGAAGGGAACCTCCATCTTCGTGGAGCCTCTCTAACAAGCTGCAACAGTAGTGATGCTTCCAGCAATAAGCGACCAGTCTTCAGCAACACATCAGTGGTTATAATCTCGGCACTATCAACTTTAGCTGTAATTGCTCTACTAGTACTTGTAGTGATCGTCTTTTTGAAAAGCAAGCAAGAATTTTTCAGGAGAGGTGGTGAAGTGGGTTTTGTTTTCTCCTCTTCATCACGAGCACAAAAGGGATCATTGATCCCTCTAACTTTGCCTGCAAAGAGAGATTTCAGATGGCAAGATATCATGGATTCCACAAACAATCTAAGCGACGAATTCATAGTTGGTTGTGGAGGTTCTGGGACAGTATACAGAGTTGAATTGCCCACTGGAGAGACCGTGGCTGTGAAGAAGATTTCAGGGAAAGATGATTATCTGTTGAACAAAAGCTTTATAAGAGAAATTAAGACTTTAGGGAGGATCAAACACAGGCATCTGGTCAAACTGATGGGTTGTTGTAGCAAAAGAAACAAAGGAACAGGTTGGAATCTGTTGATATATGAATATATGGAGAATGGGAGTGTTTGGGATTGGCTACATGGGGTGCCCCTCAAAGCAAAGAGGATCCTTGATTGGGACACAAGGCTCAAAATTGCTATTGGATTAGCTCATGGAGTGGAGTACCTCCATCATGATTGTGTGCCAAAGATCATTCACAGGGACATCAAATCCAGCAACATATTATTAGATTCCGACATGGAGGCACACCTGGGAGACTTTGGACTGGCAAAAACACTCATTGAGAATCCAGAATCTAATACCGAGTCTTATTCTTGCTTTGCTGGATCTTATGGTTACATAGCCCCAGAGTATGCTTACTCACTGAAGGCCACGGAGAACACTGATGTGTACAGCATGGGAATTGTGCTTATGGAACTTGTCAGTGGTAAAATGCCAACAGATGCAGCTTTCAGAGGAGAGATGAACATGGTTAGATGGGTGGAAATGCACGTTGACAAGCAAGACATTGCGGGTGAAGCAGTGATAGATCCTCAGCTGAAACCCCTTTTGCCTGGTGAAGAGTTTGCTGCGTTGCAGGTGCTTGAGATAGCCCTACACTGCACAAAAACTGCACCACTAGAGAGGCCAACTTCAAGGCAAGTGTCCGATCATCTTCAGCGCGTATCCAACAACAAATTGGTGGAGTTTGAGAACAAGAATCTGGATCATTACTGGTGA 3774 0.4433 MKEASMRISTLVAVVLLLCFSCALLCHGNESTMRVLLEVKSSFTEDAENVLSGWSENNTDYCSWKGVSCGGDDSVKVVGLNLSESSLGGSISPSLGRLKNLLHLDLSSNRLKGPIPPALLNLSLLESLSLHTNQLTGQIPTEIDSLMRLRVLRIGDNQLSGPIPETLGYMPYLEYLGLASCRLTGSIPPQLGRLSELQYLILQENELSGPIPSDLGYCWSLAVFTAAGNRLNDSVPSELSRLRKLQTLNLANNSLTGSIPSQLGQLSQLKYLNFMGNQLEGPIPPSLAQLGNLQNLDLSNNMLTGEIPEELGSMGQLQYLVLSRNKLYGTIPRTICSNATSLEGLMMAESGLHGEIPAELGQCQSLKQLDLSGNYLSGSIPIELYGLMGLTDLLLHNNSLVGSISPFIGNLTNMQTLALFHNNLQGSLPREIGRLGKLEIMYLYDNQLSGKIPLEIGNCSSLQMVDLFGNHFSGGIPFTIGRLKELNFLHLRQNVLVGVIPPTLGNCHKLTVLDLASNRLSGGIPATFGFLKELKLFMLYNNSLEGSIPRQLVNLANLTRVNLSNNSLNGSLAALCSSRSFLSFDVTDNGFDGEIPFQLGNSPSLERLRLGNNKFSGEIPRTLGKITMLSLLDVSGNSLTGPIPDELTLCHNLTHIDLNNNLLSGHIPPWFGSLPQLGEVKLSFNRFSGSIPPGLLKQPNLLVLSLNNNSLSGSLPDDIGDLVSLNVLRLDHNNFSGPIPHAIGKLRNLYELQLSNNGFSGEIPIEMGSLKNLQSILDLSYNNLSGHIPSSLSTLSKLEVLDLSHNELTGEVPSVVGEMTSLQKLDISYNNFRGALEKQFCRWPRESFEGNLHLRGASLTSCNSSDASSNKRPVFSNTSVVIISALSTLAVIALLVLVVIVFLKSKQEFFRRGGEVGFVFSSSSRAQKGSLIPLTLPAKRDFRWQDIMDSTNNLSDEFIVGCGGSGTVYRVELPTGETVAVKKISGKDDYLLNKSFIREIKTLGRIKHRHLVKLMGCCSKRNKGTGWNLLIYEYMENGSVWDWLHGVPLKAKRILDWDTRLKIAIGLAHGVEYLHHDCVPKIIHRDIKSSNILLDSDMEAHLGDFGLAKTLIENPESNTESYSCFAGSYGYIAPEYAYSLKATENTDVYSMGIVLMELVSGKMPTDAAFRGEMNMVRWVEMHVDKQDIAGEAVIDPQLKPLLPGEEFAALQVLEIALHCTKTAPLERPTSRQVSDHLQRVSNNKLVEFENKNLDHYW 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 30 181 IPR032675 -
Spst9g03032 1257 FunFam Uncharacterized protein 383 476 - -
Spst9g03032 1257 ProSitePatterns Protein kinases ATP-binding region signature. 960 983 IPR017441 GO:0005524
Spst9g03032 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 916 1034 - -
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 741 865 IPR032675 -
Spst9g03032 1257 SUPERFAMILY Protein kinase-like (PK-like) 930 1238 IPR011009 -
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 381 476 IPR032675 -
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 477 577 IPR032675 -
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Spst9g03032 1257 SMART serkin_6 954 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03032 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 286 382 - -
Spst9g03032 1257 ProSiteProfiles Leucine-rich repeat profile. 292 314 IPR001611 GO:0005515
Spst9g03032 1257 Pfam Protein kinase domain 959 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03032 1257 PANTHER UNNAMED PRODUCT 12 570 - -
Spst9g03032 1257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Spst9g03032 1257 SUPERFAMILY RNI-like 352 709 - -
Spst9g03032 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 477 573 - -
Spst9g03032 1257 Gene3D Transferase(Phosphotransferase) domain 1 1035 1255 - -
Spst9g03032 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 189 285 - -
Spst9g03032 1257 Pfam Leucine Rich Repeat 652 674 IPR001611 GO:0005515
Spst9g03032 1257 Pfam Leucine Rich Repeat 244 263 IPR001611 GO:0005515
Spst9g03032 1257 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 188 - -
Spst9g03032 1257 SUPERFAMILY RNI-like 80 401 - -
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 648 740 IPR032675 -
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 283 380 IPR032675 -
Spst9g03032 1257 Gene3D Phosphorylase Kinase; domain 1 916 1034 - -
Spst9g03032 1257 SUPERFAMILY L domain-like 629 863 - -
Spst9g03032 1257 FunFam Leucine-rich repeat receptor-like protein kinase 1035 1254 - -
Spst9g03032 1257 ProSiteProfiles Protein kinase domain profile. 954 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g03032 1257 Gene3D Ribonuclease Inhibitor 578 647 IPR032675 -
Spst9g03032 1257 Pfam Leucine rich repeat 776 832 IPR001611 GO:0005515
Spst9g03032 1257 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Spst9g03032 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 574 866 - -
Spst9g03032 1257 PRINTS Leucine-rich repeat signature 795 808 - -
Spst9g03032 1257 PRINTS Leucine-rich repeat signature 293 306 - -
Spst9g03032 1257 SMART LRR_typ_2 674 698 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 242 266 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 699 722 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 194 218 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 314 338 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 290 313 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 98 122 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 411 435 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 746 770 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 483 507 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 555 578 IPR003591 -
Spst9g03032 1257 SMART LRR_typ_2 795 819 IPR003591 -
Spst9g03032 1257 Pfam Leucine rich repeat N-terminal domain 35 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03032 Spst-Chr9 64343347 64347375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03032 49 675 Receptor kinase-like Gene Family AT5G56040 36.377 4.51e-97 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst9g03032 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03032 - - gmx:100797153 1958.73