Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst9g03027 | ATGGCTTTCCATAATCTCATCTTAGTGCTCGAACAAGTCATGGAAATGTCTTCATTGTTGTCGTACTTTCTCTTTTTCCTTGCTTTTCTTCTCACCATTTTCAACCTTTTTTCCCGAAGAAGAAAACACAAAAACCTTCCACCAGGTCCATCTTCTCTTCCCATAATCGGCAACCTCAACCTCCTCGAACGCCCCCTCCATCGGTTCTTCCAACGCCTGTCTAAAACACATGGCAACGTATTTTCTCTCTGGTTCGGTTCCCGTCTGGCCGTCGTCGTTTCATCGCCGTCAGCGTTCCAAGAATGCTTCACTAAAAACGACGTCGCCTTGGCCAACCGACCACGCTCCCTCTCCGGAAAACACATCTTCTACAACTACACCACCGTGGGGTCGTGCTCCTACGGCAAGCACTGGCGCAACCTCCGCCGCATCATCGCACTCGACGTTCTCTCCACTCAACGAATCCACTCCTTCGCGGGAATCAGAAAGGACGAAACGGAGAGGCTGATGCGTACCCTGGCCAAGGCCTCGTGCGTAGAGTATGCGCACGTGGAGTTAGGTTCCATGTTCCATGACATGACGTACAACAACATGATGAGGATGATATCGGGGAAGAGGTACTACGGGAACGAGATTCAGACGAAGCATTTGGAGGAGGCGAAGGAGTTCAGAGAGACGGTGGAGGAGTTGCTGCAACTAGCCGGAGTGTCCAACAAAGCAGATTATTTACCCTTCCTTCGGTGGTTCGATTTTCAGAACCTGGAAAAGAGGCTGAAGAGTATTAACAGGAGGTTCGATACGTTCTTGGATGCACTCATTCACGAGCAACGCAGCAAGAAGGAGAGAGAAAACACCATGATAGATCATCTTCTACATCTGCAAGAGTCGCAGCCCGAGTATTATACTGATCAAATCATCAAAGGCCTTGTTTTGGCTATGCTCTTCGCTGGGACAGATTCGTCAGCAGTAACTTTAGAGTGGTCACTGTCAAATTTACTGAACCACCCAGAAGTGTTGAAGAAAGCAAGAGATGAATTGGATAGTAAAGTAGGGCAAAACCGTTTGGTGAATGAGTCAGACATTCAAAATTTGCCTTACCTTAAAAAGATCATCCTTGAGACACTTAGGTTACACCCTCATGCTCCTCTAGCAATACCACATGTCTCCTCAGATGACATAATCATTGAAGAATTTAACGTTCCACGAAACACCATAATAATGGCTAACATTTGGGCTATGCAAAGAGACCCTCTATTGTGGAGTGAAGCCACATGTTTCAAACCAGAGAGGTTTGATGAAGAGGGATTGGAGAAAAAGTTGGTAGCTTTCGGGATGGGAAGAAGGGCTTGTCCAGGAGAAACCTTGGCCATGCAGAATGTTGGGTTGACTTTGGGATTGTTAATTCAATGCTTTGACTGGAAAAGAGTAAACGATGATGAGATTGATATGAGAGAGGCAAATTGGTTCACTTCATCCAGGTTAACTCCATTGAAGGCCATGTGTAAAACCCGCCCACTCATTCACCAGATTAATTTGAAATAA | 1542 | 0.463 | MAFHNLILVLEQVMEMSSLLSYFLFFLAFLLTIFNLFSRRRKHKNLPPGPSSLPIIGNLNLLERPLHRFFQRLSKTHGNVFSLWFGSRLAVVVSSPSAFQECFTKNDVALANRPRSLSGKHIFYNYTTVGSCSYGKHWRNLRRIIALDVLSTQRIHSFAGIRKDETERLMRTLAKASCVEYAHVELGSMFHDMTYNNMMRMISGKRYYGNEIQTKHLEEAKEFRETVEELLQLAGVSNKADYLPFLRWFDFQNLEKRLKSINRRFDTFLDALIHEQRSKKERENTMIDHLLHLQESQPEYYTDQIIKGLVLAMLFAGTDSSAVTLEWSLSNLLNHPEVLKKARDELDSKVGQNRLVNESDIQNLPYLKKIILETLRLHPHAPLAIPHVSSDDIIIEEFNVPRNTIIMANIWAMQRDPLLWSEATCFKPERFDEEGLEKKLVAFGMGRRACPGETLAMQNVGLTLGLLIQCFDWKRVNDDEIDMREANWFTSSRLTPLKAMCKTRPLIHQINLK | 513 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst9g03027 | 513 | Gene3D | Cytochrome P450 | 33 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506|GO:0016705 | |
| Spst9g03027 | 513 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PANTHER | CYTOCHROME P450 82C3-RELATED | 25 | 504 | - | - | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | CDD | CYP81 | 78 | 497 | - | - | |
| Spst9g03027 | 513 | FunFam | Cytochrome P450 family protein | 37 | 507 | - | - | |
| Spst9g03027 | 513 | Pfam | Cytochrome P450 | 47 | 491 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Spst9g03027 | 513 | SUPERFAMILY | Cytochrome P450 | 47 | 504 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst9g03027 | Spst-Chr9 | 64307336 | 64309072 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Spst9g03027 | 14 | 510 | Cytochrome P450 | AT4G37340 | 51.394 | 0.0 | 528 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst9g03027 | K13260 | - | gmx:100790507 | 872.463 |