Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03023 ATGGCAATGTTGTCGGTGTTGTCTTACATTGTGGTTTCCGTGGTATTGCTAGTGTTCAGTCTCAAGTACCTTCTCCAAACCAGAAAACTCAGGAACCTCCCACCGGGACCCACTCCTCTGCCCATAATAGGGAACCTTAACCTCCTCGAACAACCCATCCACCGCTTCTTCCAACGAACCTCCAAGCAGTACGGCAAAATCATTTCCCTGTGGTTCGGCTCCCGTCTCGCCGTCGTCATCTCCTCACACTCTGCATTCCAAGAATGCTTCACCAAACACGACCTTGCCTTGGCCAACCGCCTCCCTTCTCTCTCCGGCAAATACATCTTCTACAACAACACCACCGTCGGCTCCTCTTCCCATGGTGACCACTGGCGCAACCTCCGCCGCATTACCGCCCTCGACGTTCTCTCCACCCAGCGCGTCCACTCCTTCTCCGGCATCCGAAGCGACGAAACCAGGCGCTTGATTCACAGGTTGGCCAGAAACTCCCGCGAGGGTTTTTCTCCCGTGGAGATAACCTCCATGTTCAACGACTTGACCTACAATAACGTGATGAGGATGATATCGGGGAAGAGGTTTTACGGGGAAGAAAGTGAGATGAAGAACGTGGAGGAGGCCAGGGAGTTCAGAGAGACTGTGGCGGAGATGCTGCAACTCATGGGCTTGGCTAACAAGGGTGATTACTTGCCCTTCCTAAGGTGGTTCGATTTTCAAAATGTGGAGAAGCGGTTGAAGAGTATCAGTAAGAGGTACGATACCATCCTGAATAAGATCATTGATGAGAACCGTAGCAAGAAGGATGACCGTGAGAATTCCATGATCGACCATCTCCTGAAACTCCAAGAGTCCCAGCCTGAGTATTACACTGACCAAATCATCAAAGGCCTTGCTTTGGCTATGCTTTTTGGAGGAACAGACTCATCAACGGGAACTCTAGAGTGGTCGTTGTCGAATTTATTGAATCACCCAGAGGTGTTGGAGAAGGCAAGAGAGGAATTGAAGAGGGAAGTAGGGGAGGAGAGGTTGTTGAACGAGTCAGACCTTCCAAAGCTTCCTGTTGGAGGATTCACTGTCCCACGGGACACAGCAGTGATCGTCAATGGTTGGGCCATGCAGAGAGATCCTGAGTTGTGGGATGAGGCCACGTGCTTTAAACCTGAGAGGTTTGATGTGGAAGGAGAGGAGAAAAAATTAGTGGCATTCGGGATGGGAAGAAGGGCTTGCCCAGGAGAACCCATGGCCATGCAAAGCGTGAGCTATACTTTGGGATTGTTGATTCAATGTTTCGACTGGAAACGAGTGAGTGAGGAAAAGCTTGATATGAGGGAGAATAACTGGATCACCTTGTCCAGGTTGATTCCATTGGAGGCCATGTGCAAGACCCGTCCACTCTACAATAAAATTACAACCCATTAA 1419 0.5018 MAMLSVLSYIVVSVVLLVFSLKYLLQTRKLRNLPPGPTPLPIIGNLNLLEQPIHRFFQRTSKQYGKIISLWFGSRLAVVISSHSAFQECFTKHDLALANRLPSLSGKYIFYNNTTVGSSSHGDHWRNLRRITALDVLSTQRVHSFSGIRSDETRRLIHRLARNSREGFSPVEITSMFNDLTYNNVMRMISGKRFYGEESEMKNVEEAREFRETVAEMLQLMGLANKGDYLPFLRWFDFQNVEKRLKSISKRYDTILNKIIDENRSKKDDRENSMIDHLLKLQESQPEYYTDQIIKGLALAMLFGGTDSSTGTLEWSLSNLLNHPEVLEKAREELKREVGEERLLNESDLPKLPVGGFTVPRDTAVIVNGWAMQRDPELWDEATCFKPERFDVEGEEKKLVAFGMGRRACPGEPMAMQSVSYTLGLLIQCFDWKRVSEEKLDMRENNWITLSRLIPLEAMCKTRPLYNKITTH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03023 472 CDD CYP81 65 456 - -
Spst9g03023 472 Pfam Cytochrome P450 34 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 Pfam Cytochrome P450 354 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PANTHER CYTOCHROME P450 82C3-RELATED 15 353 - -
Spst9g03023 472 Gene3D Cytochrome P450 22 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Spst9g03023 472 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 Coils Coil 327 347 - -
Spst9g03023 472 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst9g03023 472 SUPERFAMILY Cytochrome P450 34 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03023 Spst-Chr9 64268403 64270004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03023 10 469 Cytochrome P450 AT4G37340 47.976 7.34e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03023 K13260 - gmx:100812102 788.104