Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03018 ATGGCTTCTTCTTTTCCTCTTTACCAGCCAACACACACCATATTCTCCAACACCCAGTTCAAGGGCTCGCGCGGTGGCTTCTTCTGGCGAACCTCTTACTCCTTTGGCTCTCTTACTGAAAACAAAGCTCGACCCATCAAATCTTCCGTCGCTACATCCCCATTTCCCCTGTTTCAGCCTCCCCATGTTGAAGAAGAGTCATCGTCTGAGTTGGAACCTGTGGATCCTGATTTCTATAAGATCGGTTATGTCCGAAGCATGCGAGCTTATGGCGTTCAATTTAAAGAAGGACCAGATGGTTTTGGTGTATATGCTTCCAAGGATGTAGAGCCTCTTCGCCGAGCAAGGCTGTCCACGAATGATTTCCCTAATGATGAAGTTGGGCAGGTTATAATGGAAATTCCCCTTGAATTGATGTTAACCATAAGCAAGAAACTCCCATGGATGTTTTTCCCTGATATAATTCCTTTGGATCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTGGGACCTAAGATTAGCATGCCTTCTTTTATTCGCATTTGACTGTGAAGGCAACTTCTGGCAATTGTACGGCGACTTCTTACCGAGTGCAGATGAGTGCACTAACCTACTTCTAGCTTCAGAGGAGGAACTTTTGGAGCTACAAGATCCCAATCTTGCTTCCACAATTAGAAAACAGCAACAACGAGCCTTAGAATTCTGGCAGAATAACTGGCACAGTGATGTACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCAGAGATTTATTTGGGCAGTAAGTATTGCACAGTCACGATGTATTAACATGCAAACGAGAATTGGTGCTCTAACTCAAGAAGCAAACATGCTGATTCCTTATGCTGATATGTTGAACCATTCATTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGATAGGATGCTTGAGGTTCTTATAAATGCTGGGCAGCGCATAAGAAAGGGGGATGAGATGACAGTTAATTACATGAGTTCGCAGAAGAACGACATGTACATGCAAAGATATGGATTTTCATCACCTGTGATTCACACAAATGCTCGTAAGATAGATACTCTTGAAGTCAGCCTCATTGGAGGTTTAACTGCCACAACAAAATCTGTTCATAAGTGA 1152 0.4262 MASSFPLYQPTHTIFSNTQFKGSRGGFFWRTSYSFGSLTENKARPIKSSVATSPFPLFQPPHVEEESSSELEPVDPDFYKIGYVRSMRAYGVQFKEGPDGFGVYASKDVEPLRRARLSTNDFPNDEVGQVIMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLFAFDCEGNFWQLYGDFLPSADECTNLLLASEEELLELQDPNLASTIRKQQQRALEFWQNNWHSDVPLKIKRLARDPQRFIWAVSIAQSRCINMQTRIGALTQEANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVNYMSSQKNDMYMQRYGFSSPVIHTNARKIDTLEVSLIGGLTATTKSVHK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03018 383 CDD SET_LSMT 91 351 - -
Spst9g03018 383 ProSiteProfiles SET domain profile. 79 337 IPR001214 GO:0005515
Spst9g03018 383 Pfam SET domain 127 336 IPR001214 GO:0005515
Spst9g03018 383 SUPERFAMILY SET domain 127 352 IPR046341 -
Spst9g03018 383 Gene3D set domain protein methyltransferase, domain 1 84 351 - -
Spst9g03018 383 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 355 - -
Spst9g03018 383 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 84 351 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst9g03018 SET 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03018 - - gmx:100790985 631.328