Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03003 ATGGAAGAACAAGAAGAGGGCAAAGTTATGGAAAAGGGGTGCAAGGAAACTCCGGTTCGAGTTTACGCTGATGGGATTTATGATCTCTTTCATTTCGGCCATGCCCGTTCGCTTGAGCAAGCCAAGAAATCGTTTCCAAACACTTATCTTCTTGTTGGATGCTGCAATGATGAGACCACCCATAAGTATAAGGGCAAAACTGTTATGACTGAAAAGGAACGCTATGAATCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATTCCAGATGCGCCATGGGTAATCACTAAGGAGTTCCTTGACAAGCATCAAATTGACTATGTAGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCCGGAAAGGATGTGTATGAATATGTTAAGTCTATTGGAAAATTTAAGGAAACCAAGCGGACTGAAGGAATTTCTACCTCTGATATTATAATGAGAATTATCAAAGATTATAATCAATATGTAATGCGAAATTTGGACCGTGGTTATACAAGAAAGGAGCTAGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCAGGAGAGGGTGAAGAAACAACAAGAGGAAGTGGGAAAGAAGATCCAAACGGTGGGAAAAATTGCTGGAATGCACCCTAATGAATGGGTTGAAAATGCAGATCGATTGGTCGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATCAGAGACAGAATACAAGAACGATTAAGGGCACAACAGCTGAAATCTCTTCTTTATGATGAGTGGGATGATGATGCATTCTATGATGATGAATACTACACCGACTATAGTGGCAAATAA 861 0.41 MEEQEEGKVMEKGCKETPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKYKGKTVMTEKERYESLRHCRWVDEVIPDAPWVITKEFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQEEVGKKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRAQQLKSLLYDEWDDDAFYDDEYYTDYSGK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03003 286 Coils Coil 183 210 - -
Spst9g03003 286 Gene3D HUPs 2 239 IPR014729 -
Spst9g03003 286 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
Spst9g03003 286 CDD CCT 18 168 IPR041723 -
Spst9g03003 286 PANTHER CYTIDYLYLTRANSFERASE 11 272 IPR045049 GO:0004105|GO:0006657
Spst9g03003 286 NCBIfam cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
Spst9g03003 286 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Spst9g03003 286 FunFam Choline-phosphate cytidylyltransferase 2 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03003 Spst-Chr9 64132852 64136710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03003 45 283 Acyl Lipid Metabolism Gene Families AT2G32260 77.917 8.47e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03003 K00968 - gmx:100786249 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g03003 9 64132852 64136710 Spst9g03003 9 64132852 64136710 ECH