Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02994 ATGCCTAGAACAAATTGTGCAAGTGATTCAGATCATAGGCAGAACCGACAACTGCACAAAATTTTCTATTGGCAAAGGATCATGGTCTTCTCAACTACCTTTCTTCATGAAGGTGGCCAATTTTTTTCTAGGAAAAGGGCAAGAGTATCAGATCTTGGACATCAAGATATTGATTTACATGCAGATGCAGGAATTTCCGATGATTTTTCCTTATCCTCAGATCAAAATATAGAAAGGTGCAGGAGTACCGGTGATGTTCCTTCTTCCAGTAACACTGATGATAAAGCTGATCCAGATTCTGGAACAGAGATGAGCTGTCCATCAAATGTTAATAGTGGATATGTTCCTGTGTGTTCTACCACAGGGAATATATCACACCTGGACCAGAGTTTCTGTGGCTATGTGCAACAGCCTGCTTTAGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATCAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTTTTGCCATCTGAGCTTCCTGTGTATCCAGTGATTAATGGCACAATAATGAACCCTGTACCACTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACGGGGTTTGCATATCTGATTATGGGTATCTCAGGCACAAGGATGCCTACAATGGTGGAATATGAACATGATAAGTCTTTTGAACTTGCTACTCCTCTGGCTGGTAACCCTGATTCACAGTCTGTTTGGCAGTCGCATGCCAATTACTGCATTAAGGAATCCAATCACTTAAATCCACACTCAGAAGCATTTAACAGTTTAATATCTTGTCAGATGTTTCAGTTACGTGAAGAATGCTGTTGGCTTTATGAGGATGAGAAGGGTATTAAACGTGGGCCACATTCTATCAACGAATTGATTTCCTGGCACAGTCATAGATATCTTAAAGATTCAACGTTGATCTTTCATGCTGATAAGAAGTATGACACCTTTGTGCTATTGTCTGTTATCAATGCATTAAAAGGAGATACCTCTGCAACCATTTGTAGACCAGGTTCTACAAGTAATGAGGTTGGTGATATGGTAGACATAATTAGTGAAATATCTGAGAACATTTCTTCGCAATTGCATATGAGTATCATGAAAGCTGGACGCAGAGTTGTGCTAGATGGAATTATTGGTGACATCATTGCAGAATATGTTACGGAAAAGAAATGCAAGAGGCAGAAGCTTGAATCAGCTGCCCATACTCCTGAAAACAAGATGTCTAAGTTTTCTGTGGAGGTCAGTAAAGGTTCTGCTACTTCCCATATTCTGGATGATCAGGCTTGTCATGAAAGTTCGAGACTGCCCTTGGCCAGTTTTAAATCAGTTGGAAGTGTTGAAAATTTTTGGTGGTCATATGCTGCTGTTCGCAAGGTACTTCTTGATTATTGCTTGCAAGTCATGTGGAATGCAGTGTTTTTTGACACAATAGCAGATTGCTTATCTTCTTGGAGGAAGAGGAAGATTTGGTTTCATCCCAAGCCTCAACCATCTGCGAATGGATGCAAATACCATGCTGAAAAGATTGAATCAGAAGCTTTGGTTCTCAAGCCAGATTCCTCTGAAAGCAATGCTCATGGCTATAATCAGTTTGGAGTACTGGCAACAGAAAGAAATTATCCTCAGTTATTTTCATCTCCTAGTAGGTTCAAAGGGGGAAACTCACTGAAAGAAGAAAATGATTCTTCCCCTTACCATAACTCTAAAGATTTGACATTCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTATCTTCAAAGGCATCTTTATCTGATTTCATACGACATTTTGTTGAGAAGGAAATCAACAAAATAGTTTCTTTCCCAGAAGAAAACAAATCAGATGAGGTTGCTGTTAGTGACACTTGTTTTTCAGATATACTTGCTGGTAAAATGTCTGTGAATGAAACTCTAAACAACAGGTCATTGGATTTGGTTGAAGCAGGAAATTCATTTGGCAAGTCTGCATCTGGAAACCTTATGTCAAATATGTTTTCAAGAGCATTTAAGGAGTTGTGTGGATATGTAGATGATGTGGTTGAAGATGAGATTGATAACCTACCACCTGGACTTGAAGAGAAGTCTCAACCAGTTGTCCTACACTACAATTCGAAATTTCGGCCTTCAAGGTCGGCGGAATGTAATCCTAAGATTACAGAATATGTTACTACTGCACTGTGCCGACAGAAACTGCATGATGAAGTTCTTGAAGAGTGGAAGTCAATGTTTCTTGACTCTGTACTCGATGAAGTTTTTGTATCATCAAGTACCATGAAGAAACATTTTAAGTTTGATGGTCAGGAAAAAGGAAAAATAATCAAAGCTATCAATGAACATTTGAATGGTGCTACTTCTGGACTGGGAAGAGTGAAGGAAGGAACAAAGAGTTCTTCTGAAGTTCGTCCGGTGATTAGAAAGAACACCTATTGCCGCAAGAAGCTGTCACAGAAGGAGTTAGTTTCGTTACAAGCTGTAGCAAAAAATGATTCTAGGCCAGGGAAGAAACAGGTGGCCAAGTTAAGGAAACTTGTTTGTGGAGATGTTGAAGAGGCTGTTGAGGTTGAAATAGATTCTGTTAAACATGGAAAGATAAGGAGGGTTAAAGGGAAGAAGGATCCATCTTCTAAGGGCAAGTCTTCTGTCATTGTTAATGGTAGCTCACGCAGTGATCAACCATCTTTAAAGAATAAAGCTGGTCAGAAAGTGTTGAAGTTTGCAGAGAATGTTAAGGATGTTGTGAAATCCACCGGAAAGAAACTTTCAGTGTCAACTGATATTAGTGTTGGCATGAAGAAGATTGTCAAAAGTGATGACACTGTAAAAGAGAAAACCTCAGGTCATTGCTCTAGAGAGATTCAAAGTGTAACAAAGAAAGTATCAAAATCAAAAAGGAAACATCAAATGAATGGTACAACATCTTCACCTCCCACAAAGATTTTGAAAATTTCAAATTGCGGTGATGTGGTAGCCAGTAAACAATTTACTGTGGAACGGATGAAGTCTGCTAAATCCAAGCCATTGAATTTATATCCTAAATCTGATGGATGTGCTAGAATTTCTATTGATGGTTGGGAATGGCATAAATGGTCTAGAAGTGCCAGTCCTGCATCTAAAGCACATCTTAGGGGTCTTCCGTGTTTCCAGAACAAGTACATATATCCTGAAAATAATCTATCTCAGTTGCCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGAGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCGGATCTCCTTAAAGTGCCTCAATTGAAGGCACGGAAGAAAAGATTACTTTTTCAAAGGAGCAAGATCCATGACTGGGGTCTTGTTGCGTTGGAGCCAATTGAGGCAGAGGATTTTGTGATTGAATATATTGGAGAACTAATTCGTCCTCGGGTTGATGCTACCAAGAAAGGTGGGATTGCAAGATTTATTAACCACTCTTGTCAGGTACTTCCCAACTGCTATACCAAGGTTATATCTGTGGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGACATATAACTGCTGGTGAAGAAATTACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCCTGTAACTGTGGTTCCAGAAAGTGCCGTGGATCATTAAATTAG 3672 0.3946 MPRTNCASDSDHRQNRQLHKIFYWQRIMVFSTTFLHEGGQFFSRKRARVSDLGHQDIDLHADAGISDDFSLSSDQNIERCRSTGDVPSSSNTDDKADPDSGTEMSCPSNVNSGYVPVCSTTGNISHLDQSFCGYVQQPALVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLIMGISGTRMPTMVEYEHDKSFELATPLAGNPDSQSVWQSHANYCIKESNHLNPHSEAFNSLISCQMFQLREECCWLYEDEKGIKRGPHSINELISWHSHRYLKDSTLIFHADKKYDTFVLLSVINALKGDTSATICRPGSTSNEVGDMVDIISEISENISSQLHMSIMKAGRRVVLDGIIGDIIAEYVTEKKCKRQKLESAAHTPENKMSKFSVEVSKGSATSHILDDQACHESSRLPLASFKSVGSVENFWWSYAAVRKVLLDYCLQVMWNAVFFDTIADCLSSWRKRKIWFHPKPQPSANGCKYHAEKIESEALVLKPDSSESNAHGYNQFGVLATERNYPQLFSSPSRFKGGNSLKEENDSSPYHNSKDLTFILESVENELHLSSKASLSDFIRHFVEKEINKIVSFPEENKSDEVAVSDTCFSDILAGKMSVNETLNNRSLDLVEAGNSFGKSASGNLMSNMFSRAFKELCGYVDDVVEDEIDNLPPGLEEKSQPVVLHYNSKFRPSRSAECNPKITEYVTTALCRQKLHDEVLEEWKSMFLDSVLDEVFVSSSTMKKHFKFDGQEKGKIIKAINEHLNGATSGLGRVKEGTKSSSEVRPVIRKNTYCRKKLSQKELVSLQAVAKNDSRPGKKQVAKLRKLVCGDVEEAVEVEIDSVKHGKIRRVKGKKDPSSKGKSSVIVNGSSRSDQPSLKNKAGQKVLKFAENVKDVVKSTGKKLSVSTDISVGMKKIVKSDDTVKEKTSGHCSREIQSVTKKVSKSKRKHQMNGTTSSPPTKILKISNCGDVVASKQFTVERMKSAKSKPLNLYPKSDGCARISIDGWEWHKWSRSASPASKAHLRGLPCFQNKYIYPENNLSQLPNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLLFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRVDATKKGGIARFINHSCQVLPNCYTKVISVEGQKKIFIYAKRHITAGEEITYNYKFPLEEKKIPCNCGSRKCRGSLN 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02994 1223 SMART set_7 1109 1207 IPR001214 GO:0005515
Spst9g02994 1223 ProSiteProfiles GYF domain profile. 280 330 IPR003169 GO:0005515
Spst9g02994 1223 MobiDBLite consensus disorder prediction 80 95 - -
Spst9g02994 1223 Gene3D SET domain 1057 1146 IPR046341 -
Spst9g02994 1223 Pfam SET domain 1149 1200 IPR001214 GO:0005515
Spst9g02994 1223 Gene3D - 269 353 IPR035445 -
Spst9g02994 1223 Gene3D - 133 204 IPR035445 -
Spst9g02994 1223 SMART PostSET_3 1207 1223 IPR003616 -
Spst9g02994 1223 ProSiteProfiles Post-SET domain profile. 1207 1223 IPR003616 -
Spst9g02994 1223 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 34 1147 IPR044570 GO:0042800|GO:0051568
Spst9g02994 1223 MobiDBLite consensus disorder prediction 80 107 - -
Spst9g02994 1223 SUPERFAMILY GYF domain 276 331 IPR035445 -
Spst9g02994 1223 MobiDBLite consensus disorder prediction 887 906 - -
Spst9g02994 1223 SUPERFAMILY SET domain 1105 1220 IPR046341 -
Spst9g02994 1223 ProSiteProfiles SET domain profile. 1109 1201 IPR001214 GO:0005515
Spst9g02994 1223 Gene3D SET domain 1147 1223 IPR046341 -
Spst9g02994 1223 MobiDBLite consensus disorder prediction 875 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02994 Spst-Chr9 64071318 64085578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02994 1100 1223 C2H2 Transcription Factor Family AT2G23740 32.353 1.42e-11 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst9g02994 SET 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02994 - - gmx:100805708 1829.68