Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02987 ATGGAGGAGGCACATAAGGGGGAGCAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGGAGGGGAAGAAGTGAAGTACCGAGGTGTTAGAAAGAGGCCATGGGGTAAGTACGGAGCAGAGATTAGAGATCCAAGAAAAGCCACGGGAAGACAGTGGTTAGGGACATTTGACACAGCAGAAGAAGCAGCTAGAGCTTATGATCGTGCAGCCATTGAATTGAGGGGTGCCCTTGCAATCCTTAATTTTCCTGATGAGCACCATTTTCTATCATCAAATTCTTCAACTACGGCCAATGGAAGTTCTTCTTCTTCTTCTTCTTCAAAACAGAAGGAAGTTATCGAGTTCGAGTATTTGGATGATAAGGTGTTGGAAGACCTTCTTGAGCTGGCTTCAAATTGGAGATTCTTGGAAGATGATGGAAGTAAGGAGATGGATTTAACTGATCAAACGGTTGGAAATTTTGAGGGTACAAACAAAAGAAAACAATAA 495 0.4101 MEEAHKGEQEKEKEKEKEKEKGGEEVKYRGVRKRPWGKYGAEIRDPRKATGRQWLGTFDTAEEAARAYDRAAIELRGALAILNFPDEHHFLSSNSSTTANGSSSSSSSSKQKEVIEFEYLDDKVLEDLLELASNWRFLEDDGSKEMDLTDQTVGNFEGTNKRKQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02987 164 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Spst9g02987 164 MobiDBLite consensus disorder prediction 1 26 - -
Spst9g02987 164 FunFam Ethylene-responsive transcription factor 2 27 87 - -
Spst9g02987 164 Coils Coil 1 21 - -
Spst9g02987 164 MobiDBLite consensus disorder prediction 90 112 - -
Spst9g02987 164 SUPERFAMILY DNA-binding domain 27 87 IPR016177 GO:0003677
Spst9g02987 164 Pfam AP2 domain 27 77 IPR001471 GO:0003700|GO:0006355
Spst9g02987 164 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Spst9g02987 164 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Spst9g02987 164 PANTHER DNA-BINDING DOMAIN 10 129 IPR044808 GO:0003700|GO:0009873
Spst9g02987 164 ProSiteProfiles AP2/ERF domain profile. 27 85 IPR001471 GO:0003700|GO:0006355
Spst9g02987 164 SMART rav1_2 27 93 IPR001471 GO:0003700|GO:0006355
Spst9g02987 164 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02987 Spst-Chr9 63995573 63997838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02987 25 130 AP2-EREBP Transcription Factor Family AT3G23230 57.265 4.89e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst9g02987 AP2 7.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02987 - - gmx:100796977 149.443