Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02986 ATGGAGAAAGCGAGAGGAGAGGAAGAAGTGAAGTACCGTGGTGTGAGAAAGAGACCATGGGGTAAGTTTGGAGCAGAGATTAGAGATCCAACAAAACCTACTGGAAGACAATGGTTGGGGACATTTGACACTGCAGAAGAAGCAGCAAGAGCTTATGATCGTGCAGCCATTGGTTTGAGGGGTGCTCTTGCGATCCTTAATTTTCCCGATGAGTATTGTTCTCATCTTCCTTTTGTATTGTCAAATTCTTCTGCTATGGTCAACAATGGAAGCTCTTTGGATAGGAAGGAAGTTATAGAGTTCGAGTATTTGGATGACAAGGTGTTGGAGGATCTTCTTGCGATAGAAGAGAAGAGAAGGAATGGAGATTAG 372 0.4355 MEKARGEEEVKYRGVRKRPWGKFGAEIRDPTKPTGRQWLGTFDTAEEAARAYDRAAIGLRGALAILNFPDEYCSHLPFVLSNSSAMVNNGSSLDRKEVIEFEYLDDKVLEDLLAIEEKRRNGD 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02986 123 PANTHER DNA-BINDING DOMAIN 7 83 IPR044808 GO:0003700|GO:0009873
Spst9g02986 123 ProSiteProfiles AP2/ERF domain profile. 11 69 IPR001471 GO:0003700|GO:0006355
Spst9g02986 123 SMART rav1_2 11 75 IPR001471 GO:0003700|GO:0006355
Spst9g02986 123 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Spst9g02986 123 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700|GO:0006355
Spst9g02986 123 FunFam Ethylene-responsive transcription factor 2 11 70 - -
Spst9g02986 123 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Spst9g02986 123 SUPERFAMILY DNA-binding domain 11 71 IPR016177 GO:0003677
Spst9g02986 123 CDD AP2 11 70 IPR001471 GO:0003700|GO:0006355
Spst9g02986 123 Gene3D AP2/ERF domain 10 70 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02986 Spst-Chr9 63994692 63995063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02986 7 120 AP2-EREBP Transcription Factor Family AT3G23230 56.000 2.07e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst9g02986 AP2 4.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02986 - - gmx:100797513 196.823